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ATP5MGL (ATP synthase membrane subunit g like)

Identity

Alias (NCBI)ATP5K2
ATP5L2
HGNC (Hugo) ATP5MGL
LocusID (NCBI) 267020
Atlas_Id 80645
Location 22q13.2  [Link to chromosome band 22q13]
Location_base_pair Starts at 42639803 and ends at 42640601 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ATP5MGL   13213
Cards
Entrez_Gene (NCBI)ATP5MGL  267020  ATP synthase membrane subunit g like
AliasesATP5K2; ATP5L2
GeneCards (Weizmann)ATP5MGL
Ensembl hg19 (Hinxton)ENSG00000249222 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249222 [Gene_View]  ENSG00000249222 [Sequence]  chr22:42639803-42640601 [Contig_View]  ATP5MGL [Vega]
ICGC DataPortalENSG00000249222
TCGA cBioPortalATP5MGL
AceView (NCBI)ATP5MGL
Genatlas (Paris)ATP5MGL
WikiGenes267020
SOURCE (Princeton)ATP5MGL
Genetics Home Reference (NIH)ATP5MGL
Genomic and cartography
GoldenPath hg38 (UCSC)ATP5MGL  -     chr22:42639803-42640601 -  22q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATP5MGL  -     22q13.2   [Description]    (hg19-Feb_2009)
GoldenPathATP5MGL - 22q13.2 [CytoView hg19]  ATP5MGL - 22q13.2 [CytoView hg38]
ImmunoBaseENSG00000249222
genome Data Viewer NCBIATP5MGL [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF092923 BC093719 BC093721
RefSeq transcript (Entrez)NM_001165877
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ATP5MGL
Alternative Splicing GalleryENSG00000249222
Gene ExpressionATP5MGL [ NCBI-GEO ]   ATP5MGL [ EBI - ARRAY_EXPRESS ]   ATP5MGL [ SEEK ]   ATP5MGL [ MEM ]
Gene Expression Viewer (FireBrowse)ATP5MGL [ Firebrowse - Broad ]
GenevisibleExpression of ATP5MGL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)267020
GTEX Portal (Tissue expression)ATP5MGL
Human Protein AtlasENSG00000249222-ATP5MGL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z4Y8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z4Y8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z4Y8
Splice isoforms : SwissVarQ7Z4Y8
PhosPhoSitePlusQ7Z4Y8
Domains : Interpro (EBI)ATP_synth_F0_gsu_mt    ATP_synth_su_G_mt_met   
Domain families : Pfam (Sanger)ATP-synt_G (PF04718)   
Domain families : Pfam (NCBI)pfam04718   
Conserved Domain (NCBI)ATP5MGL
DMDM Disease mutations267020
Blocks (Seattle)ATP5MGL
SuperfamilyQ7Z4Y8
Human Protein Atlas [tissue]ENSG00000249222-ATP5MGL [tissue]
Peptide AtlasQ7Z4Y8
IPIIPI00385203   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z4Y8
IntAct (EBI)Q7Z4Y8
FunCoupENSG00000249222
BioGRIDATP5MGL
STRING (EMBL)ATP5MGL
ZODIACATP5MGL
Ontologies - Pathways
QuickGOQ7Z4Y8
Ontology : AmiGOmitochondrial proton-transporting ATP synthase complex, coupling factor F(o)  mitochondrion  ATP synthesis coupled proton transport  proton-transporting ATP synthase activity, rotational mechanism  
Ontology : EGO-EBImitochondrial proton-transporting ATP synthase complex, coupling factor F(o)  mitochondrion  ATP synthesis coupled proton transport  proton-transporting ATP synthase activity, rotational mechanism  
NDEx NetworkATP5MGL
Atlas of Cancer Signalling NetworkATP5MGL
Wikipedia pathwaysATP5MGL
Orthology - Evolution
OrthoDB267020
GeneTree (enSembl)ENSG00000249222
Phylogenetic Trees/Animal Genes : TreeFamATP5MGL
HOGENOMQ7Z4Y8
Homologs : HomoloGeneATP5MGL
Homology/Alignments : Family Browser (UCSC)ATP5MGL
Gene fusions - Rearrangements
Fusion : QuiverATP5MGL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerATP5MGL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ATP5MGL
dbVarATP5MGL
ClinVarATP5MGL
1000_GenomesATP5MGL 
Exome Variant ServerATP5MGL
GNOMAD BrowserENSG00000249222
Varsome BrowserATP5MGL
Genetic variants : HAPMAP267020
Genomic Variants (DGV)ATP5MGL [DGVbeta]
DECIPHERATP5MGL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisATP5MGL 
Mutations
ICGC Data PortalATP5MGL 
TCGA Data PortalATP5MGL 
Broad Tumor PortalATP5MGL
OASIS PortalATP5MGL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICATP5MGL  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DATP5MGL
Mutations and Diseases : HGMDATP5MGL
BioMutasearch ATP5MGL
DgiDB (Drug Gene Interaction Database)ATP5MGL
DoCM (Curated mutations)ATP5MGL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ATP5MGL (select a term)
intoGenATP5MGL
Cancer3DATP5MGL(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETATP5MGL
MedgenATP5MGL
Genetic Testing Registry ATP5MGL
NextProtQ7Z4Y8 [Medical]
TSGene267020
GENETestsATP5MGL
Target ValidationATP5MGL
Huge Navigator ATP5MGL [HugePedia]
snp3D : Map Gene to Disease267020
BioCentury BCIQATP5MGL
ClinGenATP5MGL
Clinical trials, drugs, therapy
Protein Interactions : CTD267020
Pharm GKB GenePA134948694
Clinical trialATP5MGL
Miscellaneous
canSAR (ICR)ATP5MGL (select the gene name)
HarmonizomeATP5MGL
DataMed IndexATP5MGL
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATP5MGL
EVEXATP5MGL
GoPubMedATP5MGL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:06:15 CEST 2020

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