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ATP5PO (ATP synthase peripheral stalk subunit OSCP)

Identity

Alias (NCBI)ATP5O
ATPO
HMC08D05
OSCP
HGNC (Hugo) ATP5PO
LocusID (NCBI) 539
Atlas_Id 80475
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 33903453 and ends at 33915804 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)ATP5PO   850
Cards
Entrez_Gene (NCBI)ATP5PO    ATP synthase peripheral stalk subunit OSCP
AliasesATP5O; ATPO; HMC08D05; OSCP
GeneCards (Weizmann)ATP5PO
Ensembl hg19 (Hinxton)ENSG00000241837 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241837 [Gene_View]  ENSG00000241837 [Sequence]  chr21:33903453-33915804 [Contig_View]  ATP5PO [Vega]
ICGC DataPortalENSG00000241837
TCGA cBioPortalATP5PO
AceView (NCBI)ATP5PO
Genatlas (Paris)ATP5PO
SOURCE (Princeton)ATP5PO
Genetics Home Reference (NIH)ATP5PO
Genomic and cartography
GoldenPath hg38 (UCSC)ATP5PO  -     chr21:33903453-33915804 -  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATP5PO  -     21q22.11   [Description]    (hg19-Feb_2009)
GoldenPathATP5PO - 21q22.11 [CytoView hg19]  ATP5PO - 21q22.11 [CytoView hg38]
ImmunoBaseENSG00000241837
Genome Data Viewer NCBIATP5PO [Mapview hg19]  
OMIM600828   
Gene and transcription
Genbank (Entrez)AF088071 AK093795 AK124187 AK222608 AK222962
RefSeq transcript (Entrez)NM_001697
Consensus coding sequences : CCDS (NCBI)ATP5PO
Gene ExpressionATP5PO [ NCBI-GEO ]   ATP5PO [ EBI - ARRAY_EXPRESS ]   ATP5PO [ SEEK ]   ATP5PO [ MEM ]
Gene Expression Viewer (FireBrowse)ATP5PO [ Firebrowse - Broad ]
GenevisibleExpression of ATP5PO in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)539
GTEX Portal (Tissue expression)ATP5PO
Human Protein AtlasENSG00000241837-ATP5PO [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP48047   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP48047  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP48047
PhosPhoSitePlusP48047
Domaine pattern : Prosite (Expaxy)ATPASE_DELTA (PS00389)   
Domains : Interpro (EBI)ATP_synth_OSCP/delta_N_sf    ATPase_OSCP/d_CS    ATPase_OSCP/dsu   
Domain families : Pfam (Sanger)OSCP (PF00213)   
Domain families : Pfam (NCBI)pfam00213   
Conserved Domain (NCBI)ATP5PO
SuperfamilyP48047
AlphaFold pdb e-kbP48047   
Human Protein Atlas [tissue]ENSG00000241837-ATP5PO [tissue]
Protein Interaction databases
DIP (DOE-UCLA)P48047
IntAct (EBI)P48047
BioGRIDATP5PO
STRING (EMBL)ATP5PO
ZODIACATP5PO
Ontologies - Pathways
QuickGOP48047
Ontology : AmiGOmitochondrial proton-transporting ATP synthase, stator stalk  protein binding  nucleus  mitochondrion  mitochondrion  mitochondrial inner membrane  mitochondrial proton-transporting ATP synthase complex  mitochondrial proton-transporting ATP synthase complex  plasma membrane  ATP biosynthetic process  ATP biosynthetic process  ATP synthesis coupled proton transport  cristae formation  mitochondrial ATP synthesis coupled proton transport  mitochondrial ATP synthesis coupled proton transport  mitochondrial ATP synthesis coupled proton transport  proton-transporting ATP synthase complex, catalytic core F(1)  proton-transporting ATP synthase activity, rotational mechanism  proton-transporting ATP synthase activity, rotational mechanism  proton transmembrane transport  
Ontology : EGO-EBImitochondrial proton-transporting ATP synthase, stator stalk  protein binding  nucleus  mitochondrion  mitochondrion  mitochondrial inner membrane  mitochondrial proton-transporting ATP synthase complex  mitochondrial proton-transporting ATP synthase complex  plasma membrane  ATP biosynthetic process  ATP biosynthetic process  ATP synthesis coupled proton transport  cristae formation  mitochondrial ATP synthesis coupled proton transport  mitochondrial ATP synthesis coupled proton transport  mitochondrial ATP synthesis coupled proton transport  proton-transporting ATP synthase complex, catalytic core F(1)  proton-transporting ATP synthase activity, rotational mechanism  proton-transporting ATP synthase activity, rotational mechanism  proton transmembrane transport  
NDEx NetworkATP5PO
Atlas of Cancer Signalling NetworkATP5PO
Wikipedia pathwaysATP5PO
Orthology - Evolution
OrthoDB539
GeneTree (enSembl)ENSG00000241837
Phylogenetic Trees/Animal Genes : TreeFamATP5PO
Homologs : HomoloGeneATP5PO
Homology/Alignments : Family Browser (UCSC)ATP5PO
Gene fusions - Rearrangements
Fusion : QuiverATP5PO
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerATP5PO [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ATP5PO
dbVarATP5PO
ClinVarATP5PO
MonarchATP5PO
1000_GenomesATP5PO 
Exome Variant ServerATP5PO
GNOMAD BrowserENSG00000241837
Varsome BrowserATP5PO
ACMGATP5PO variants
VarityP48047
Genomic Variants (DGV)ATP5PO [DGVbeta]
DECIPHERATP5PO [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisATP5PO 
Mutations
ICGC Data PortalATP5PO 
TCGA Data PortalATP5PO 
Broad Tumor PortalATP5PO
OASIS PortalATP5PO [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICATP5PO  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DATP5PO
Mutations and Diseases : HGMDATP5PO
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaATP5PO
DgiDB (Drug Gene Interaction Database)ATP5PO
DoCM (Curated mutations)ATP5PO
CIViC (Clinical Interpretations of Variants in Cancer)ATP5PO
Cancer3DATP5PO
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600828   
Orphanet
DisGeNETATP5PO
MedgenATP5PO
Genetic Testing Registry ATP5PO
NextProtP48047 [Medical]
GENETestsATP5PO
Target ValidationATP5PO
Huge Navigator ATP5PO [HugePedia]
ClinGenATP5PO
Clinical trials, drugs, therapy
MyCancerGenomeATP5PO
Protein Interactions : CTDATP5PO
Pharm GKB GenePA25144
PharosP48047
Clinical trialATP5PO
Miscellaneous
canSAR (ICR)ATP5PO
HarmonizomeATP5PO
DataMed IndexATP5PO
Probes
Litterature
PubMed115 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXATP5PO
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:42:57 CEST 2021

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