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ATP6 (ATP synthase F0 subunit 6)

Identity

HGNC (Hugo) MT-ATP6
LocusID (NCBI) 4508
Atlas_Id 55922
Location M  [Link to chromosome band ]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MT-ATP6   7414
Cards
Entrez_Gene (NCBI)ATP6  4508  ATP synthase F0 subunit 6
AliasesATPase6; MTATP6
GeneCards (Weizmann)ATP6
Ensembl hg19 (Hinxton) [Gene_View]  - [Contig_View]  ATP6 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  ATP6 [Vega]
TCGA cBioPortalATP6
AceView (NCBI)ATP6
Genatlas (Paris)ATP6
WikiGenes4508
SOURCE (Princeton)ATP6
Genetics Home Reference (NIH)ATP6
Genomic and cartography
GoldenPath hg19 (UCSC)ATP6  -  
GoldenPath hg38 (UCSC)ATP6  -  
EnsemblATP6 - [CytoView hg19]  ATP6 - [CytoView hg38]
Mapping of homologs : NCBIATP6 [Mapview hg19]  ATP6 [Mapview hg38]
OMIM516060   535000   551500   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ATP6
Gene ExpressionATP6 [ NCBI-GEO ]   ATP6 [ EBI - ARRAY_EXPRESS ]   ATP6 [ SEEK ]   ATP6 [ MEM ]
Gene Expression Viewer (FireBrowse)ATP6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4508
GTEX Portal (Tissue expression)ATP6
Protein : pattern, domain, 3D structure
UniProt/SwissProtP00846   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP00846  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP00846
Splice isoforms : SwissVarP00846
PhosPhoSitePlusP00846
Domaine pattern : Prosite (Expaxy)ATPASE_A (PS00449)   
Domains : Interpro (EBI)ATPase_F0-cplx_asu    ATPase_F0-cplx_asu_AS   
Domain families : Pfam (Sanger)ATP-synt_A (PF00119)   
Domain families : Pfam (NCBI)pfam00119   
Conserved Domain (NCBI)ATP6
DMDM Disease mutations4508
Blocks (Seattle)ATP6
SuperfamilyP00846
Peptide AtlasP00846
IPIIPI00654820   IPI00743734   IPI00954924   
Protein Interaction databases
DIP (DOE-UCLA)P00846
IntAct (EBI)P00846
BioGRIDATP6
STRING (EMBL)ATP6
ZODIACATP6
Ontologies - Pathways
QuickGOP00846
Ontology : AmiGO
Ontology : EGO-EBI
Pathways : KEGGOxidative phosphorylation    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkATP6
Atlas of Cancer Signalling NetworkATP6
Wikipedia pathwaysATP6
Orthology - Evolution
OrthoDB4508
Phylogenetic Trees/Animal Genes : TreeFamMT-ATP6
HOVERGENP00846
HOGENOMP00846
Homologs : HomoloGeneATP6
Homology/Alignments : Family Browser (UCSC)ATP6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerATP6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ATP6
dbVarATP6
ClinVarATP6
1000_GenomesATP6 
Exome Variant ServerATP6
ExAC (Exome Aggregation Consortium)ATP6 (select the gene name)
Genetic variants : HAPMAP4508
Genomic Variants (DGV)ATP6 [DGVbeta]
DECIPHER (Syndromes)-  
CONAN: Copy Number AnalysisATP6 
Mutations
ICGC Data PortalMT-ATP6 
TCGA Data PortalMT-ATP6 
Broad Tumor PortalMT-ATP6
OASIS PortalMT-ATP6 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMT-ATP6
BioMutasearch ATP6
DgiDB (Drug Gene Interaction Database)ATP6
DoCM (Curated mutations)ATP6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ATP6 (select a term)
intoGenATP6
Cancer3DATP6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM516060    535000    551500   
Orphanet
MedgenATP6
Genetic Testing Registry ATP6
NextProtP00846 [Medical]
TSGene4508
GENETestsATP6
Huge Navigator MT-ATP6 [HugePedia]
snp3D : Map Gene to Disease4508
BioCentury BCIQATP6
ClinGenATP6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4508
Chemical/Pharm GKB GenePA31221
Clinical trialATP6
Miscellaneous
canSAR (ICR)ATP6 (select the gene name)
Probes
Litterature
PubMed59 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATP6
EVEXATP6
GoPubMedATP6
iHOPATP6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Nov 18 19:31:46 CET 2016

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