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ATP6V0CP3 (ATPase H+ transporting V0 subunit c pseudogene 3)

Identity

Alias_namesATPase, H+ transporting, lysosomal 16kDa, V0 subunit c pseudogene 3
Other alias-
HGNC (Hugo) ATP6V0CP3
LocusID (NCBI) 442211
Atlas_Id 60635
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 42727576 and ends at 42728194 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ATP6V0CP3   40001
Cards
Entrez_Gene (NCBI)ATP6V0CP3  442211  ATPase H+ transporting V0 subunit c pseudogene 3
Aliases
GeneCards (Weizmann)ATP6V0CP3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6:42727576-42728194 [Contig_View]  ATP6V0CP3 [Vega]
TCGA cBioPortalATP6V0CP3
AceView (NCBI)ATP6V0CP3
Genatlas (Paris)ATP6V0CP3
WikiGenes442211
SOURCE (Princeton)ATP6V0CP3
Genetics Home Reference (NIH)ATP6V0CP3
Genomic and cartography
GoldenPath hg38 (UCSC)ATP6V0CP3  -     chr6:42727576-42728194 +  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATP6V0CP3  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblATP6V0CP3 - 6p21.1 [CytoView hg19]  ATP6V0CP3 - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBIATP6V0CP3 [Mapview hg19]  ATP6V0CP3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BQ447003
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ATP6V0CP3
Cluster EST : UnigeneHs.563394 [ NCBI ]
CGAP (NCI)Hs.563394
Gene ExpressionATP6V0CP3 [ NCBI-GEO ]   ATP6V0CP3 [ EBI - ARRAY_EXPRESS ]   ATP6V0CP3 [ SEEK ]   ATP6V0CP3 [ MEM ]
Gene Expression Viewer (FireBrowse)ATP6V0CP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)442211
GTEX Portal (Tissue expression)ATP6V0CP3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ATP6V0CP3
DMDM Disease mutations442211
Blocks (Seattle)ATP6V0CP3
Protein Interaction databases
BioGRIDATP6V0CP3
STRING (EMBL)ATP6V0CP3
ZODIACATP6V0CP3
Ontologies - Pathways
Huge Navigator ATP6V0CP3 [HugePedia]
snp3D : Map Gene to Disease442211
BioCentury BCIQATP6V0CP3
ClinGenATP6V0CP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD442211
Clinical trialATP6V0CP3
Miscellaneous
canSAR (ICR)ATP6V0CP3 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineATP6V0CP3
EVEXATP6V0CP3
GoPubMedATP6V0CP3
iHOPATP6V0CP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Feb 23 18:11:36 CET 2018

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