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ATP6V0E2 (ATPase H+ transporting V0 subunit e2)

Identity

Alias_namesC7orf32
ATP6V0E2L
chromosome 7 open reading frame 32
ATPase, H+ transporting V0 subunit E isoform 2-like (rat)
ATPase, H+ transporting V0 subunit e2
Other alias
HGNC (Hugo) ATP6V0E2
LocusID (NCBI) 155066
Atlas_Id 60638
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 149872968 and ends at 149880712 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ATP6V0E2 (7q36.1) / KIF5A (12q13.3)IL20RA (6q23.3) / ATP6V0E2 (7q36.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ATP6V0E2   21723
Cards
Entrez_Gene (NCBI)ATP6V0E2  155066  ATPase H+ transporting V0 subunit e2
AliasesATP6V0E2L; C7orf32
GeneCards (Weizmann)ATP6V0E2
Ensembl hg19 (Hinxton)ENSG00000171130 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171130 [Gene_View]  chr7:149872968-149880712 [Contig_View]  ATP6V0E2 [Vega]
ICGC DataPortalENSG00000171130
TCGA cBioPortalATP6V0E2
AceView (NCBI)ATP6V0E2
Genatlas (Paris)ATP6V0E2
WikiGenes155066
SOURCE (Princeton)ATP6V0E2
Genetics Home Reference (NIH)ATP6V0E2
Genomic and cartography
GoldenPath hg38 (UCSC)ATP6V0E2  -     chr7:149872968-149880712 +  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATP6V0E2  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblATP6V0E2 - 7q36.1 [CytoView hg19]  ATP6V0E2 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIATP6V0E2 [Mapview hg19]  ATP6V0E2 [Mapview hg38]
OMIM611019   
Gene and transcription
Genbank (Entrez)AA912295 AF452639 AK057700 AK094602 AK098362
RefSeq transcript (Entrez)NM_001100592 NM_001289990 NM_145230
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ATP6V0E2
Cluster EST : UnigeneHs.556998 [ NCBI ]
CGAP (NCI)Hs.556998
Alternative Splicing GalleryENSG00000171130
Gene ExpressionATP6V0E2 [ NCBI-GEO ]   ATP6V0E2 [ EBI - ARRAY_EXPRESS ]   ATP6V0E2 [ SEEK ]   ATP6V0E2 [ MEM ]
Gene Expression Viewer (FireBrowse)ATP6V0E2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)155066
GTEX Portal (Tissue expression)ATP6V0E2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHE4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHE4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHE4
Splice isoforms : SwissVarQ8NHE4
PhosPhoSitePlusQ8NHE4
Domains : Interpro (EBI)ATPase_V0-cplx_e1/e2_su    ATPase_V0-cplx_e1/e2_su_met   
Domain families : Pfam (Sanger)ATP_synt_H (PF05493)   
Domain families : Pfam (NCBI)pfam05493   
Conserved Domain (NCBI)ATP6V0E2
DMDM Disease mutations155066
Blocks (Seattle)ATP6V0E2
SuperfamilyQ8NHE4
Human Protein AtlasENSG00000171130
Peptide AtlasQ8NHE4
HPRD12920
IPIIPI00640032   IPI00942017   IPI00854692   IPI00413616   IPI00854725   IPI00946596   IPI00946228   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHE4
IntAct (EBI)Q8NHE4
FunCoupENSG00000171130
BioGRIDATP6V0E2
STRING (EMBL)ATP6V0E2
ZODIACATP6V0E2
Ontologies - Pathways
QuickGOQ8NHE4
Ontology : AmiGOvacuolar acidification  insulin receptor signaling pathway  endosome membrane  ATP hydrolysis coupled proton transport  membrane  integral component of membrane  cell growth  regulation of macroautophagy  phagocytic vesicle membrane  proton-transporting V-type ATPase, V0 domain  transferrin transport  ion transmembrane transport  ATPase coupled ion transmembrane transporter activity  proton-transporting ATPase activity, rotational mechanism  phagosome acidification  
Ontology : EGO-EBIvacuolar acidification  insulin receptor signaling pathway  endosome membrane  ATP hydrolysis coupled proton transport  membrane  integral component of membrane  cell growth  regulation of macroautophagy  phagocytic vesicle membrane  proton-transporting V-type ATPase, V0 domain  transferrin transport  ion transmembrane transport  ATPase coupled ion transmembrane transporter activity  proton-transporting ATPase activity, rotational mechanism  phagosome acidification  
Pathways : KEGGOxidative phosphorylation    Phagosome    Synaptic vesicle cycle    Collecting duct acid secretion    Vibrio cholerae infection    Epithelial cell signaling in Helicobacter pylori infection    Rheumatoid arthritis   
NDEx NetworkATP6V0E2
Atlas of Cancer Signalling NetworkATP6V0E2
Wikipedia pathwaysATP6V0E2
Orthology - Evolution
OrthoDB155066
GeneTree (enSembl)ENSG00000171130
Phylogenetic Trees/Animal Genes : TreeFamATP6V0E2
HOVERGENQ8NHE4
HOGENOMQ8NHE4
Homologs : HomoloGeneATP6V0E2
Homology/Alignments : Family Browser (UCSC)ATP6V0E2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerATP6V0E2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ATP6V0E2
dbVarATP6V0E2
ClinVarATP6V0E2
1000_GenomesATP6V0E2 
Exome Variant ServerATP6V0E2
ExAC (Exome Aggregation Consortium)ATP6V0E2 (select the gene name)
Genetic variants : HAPMAP155066
Genomic Variants (DGV)ATP6V0E2 [DGVbeta]
DECIPHERATP6V0E2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisATP6V0E2 
Mutations
ICGC Data PortalATP6V0E2 
TCGA Data PortalATP6V0E2 
Broad Tumor PortalATP6V0E2
OASIS PortalATP6V0E2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICATP6V0E2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDATP6V0E2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ATP6V0E2
DgiDB (Drug Gene Interaction Database)ATP6V0E2
DoCM (Curated mutations)ATP6V0E2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ATP6V0E2 (select a term)
intoGenATP6V0E2
Cancer3DATP6V0E2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611019   
Orphanet
MedgenATP6V0E2
Genetic Testing Registry ATP6V0E2
NextProtQ8NHE4 [Medical]
TSGene155066
GENETestsATP6V0E2
Target ValidationATP6V0E2
Huge Navigator ATP6V0E2 [HugePedia]
snp3D : Map Gene to Disease155066
BioCentury BCIQATP6V0E2
ClinGenATP6V0E2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD155066
Chemical/Pharm GKB GenePA162377277
Clinical trialATP6V0E2
Miscellaneous
canSAR (ICR)ATP6V0E2 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATP6V0E2
EVEXATP6V0E2
GoPubMedATP6V0E2
iHOPATP6V0E2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:02:03 CEST 2017

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