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ATP8B5P (ATPase, class I, type 8B, member 5, pseudogene)

Identity

Alias_namesATPase, class I, type 8B, member 5, pseudogene
Alias_symbol (synonym)FetA
Other alias
HGNC (Hugo) ATP8B5P
LocusID (NCBI) 158381
Atlas_Id 60651
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 35406752 and ends at 35483026 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ANKRD1 (10q23.31) / ATP8B5P (9p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ATP8B5P   27245
Cards
Entrez_Gene (NCBI)ATP8B5P  158381  ATPase, class I, type 8B, member 5, pseudogene
AliasesFetA
GeneCards (Weizmann)ATP8B5P
Ensembl hg19 (Hinxton)ENSG00000179766 [Gene_View]  chr9:35406752-35483026 [Contig_View]  ATP8B5P [Vega]
Ensembl hg38 (Hinxton)ENSG00000179766 [Gene_View]  chr9:35406752-35483026 [Contig_View]  ATP8B5P [Vega]
ICGC DataPortalENSG00000179766
TCGA cBioPortalATP8B5P
AceView (NCBI)ATP8B5P
Genatlas (Paris)ATP8B5P
WikiGenes158381
SOURCE (Princeton)ATP8B5P
Genetics Home Reference (NIH)ATP8B5P
Genomic and cartography
GoldenPath hg19 (UCSC)ATP8B5P  -     chr9:35406752-35483026 +  9p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ATP8B5P  -     9p13.3   [Description]    (hg38-Dec_2013)
EnsemblATP8B5P - 9p13.3 [CytoView hg19]  ATP8B5P - 9p13.3 [CytoView hg38]
Mapping of homologs : NCBIATP8B5P [Mapview hg19]  ATP8B5P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK310278 BC031276 BC035229 BC047452 BC130448
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008413 NW_004929342
Consensus coding sequences : CCDS (NCBI)ATP8B5P
Cluster EST : UnigeneHs.575661 [ NCBI ]
CGAP (NCI)Hs.575661
Alternative Splicing GalleryENSG00000179766
Gene ExpressionATP8B5P [ NCBI-GEO ]   ATP8B5P [ EBI - ARRAY_EXPRESS ]   ATP8B5P [ SEEK ]   ATP8B5P [ MEM ]
Gene Expression Viewer (FireBrowse)ATP8B5P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)158381
GTEX Portal (Tissue expression)ATP8B5P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ATP8B5P
DMDM Disease mutations158381
Blocks (Seattle)ATP8B5P
Human Protein AtlasENSG00000179766
HPRD18739
IPIIPI00644725   
Protein Interaction databases
FunCoupENSG00000179766
BioGRIDATP8B5P
STRING (EMBL)ATP8B5P
ZODIACATP8B5P
Ontologies - Pathways
Huge Navigator ATP8B5P [HugePedia]
snp3D : Map Gene to Disease158381
BioCentury BCIQATP8B5P
ClinGenATP8B5P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD158381
Clinical trialATP8B5P
Miscellaneous
canSAR (ICR)ATP8B5P (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATP8B5P
EVEXATP8B5P
GoPubMedATP8B5P
iHOPATP8B5P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:55:28 CET 2017

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