Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ATPIF1 (ATPase inhibitory factor 1)

Identity

Alias_symbol (synonym)ATPI
IP
ATPIP
MGC1167
MGC8898
Other alias
HGNC (Hugo) ATPIF1
LocusID (NCBI) 93974
Atlas_Id 51658
Location 1p35.3  [Link to chromosome band 1p35]
Location_base_pair Starts at 28236091 and ends at 28238105 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ATPIF1 (1p35.3) / ATPIF1 (1p35.3)ATPIF1 (1p35.3) / STIL (1p33)CD81 (11p15.5) / ATPIF1 (1p35.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ATPIF1   871
Cards
Entrez_Gene (NCBI)ATPIF1  93974  ATPase inhibitory factor 1
AliasesATPI; ATPIP; IP
GeneCards (Weizmann)ATPIF1
Ensembl hg19 (Hinxton)ENSG00000130770 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130770 [Gene_View]  chr1:28236091-28238105 [Contig_View]  ATPIF1 [Vega]
ICGC DataPortalENSG00000130770
TCGA cBioPortalATPIF1
AceView (NCBI)ATPIF1
Genatlas (Paris)ATPIF1
WikiGenes93974
SOURCE (Princeton)ATPIF1
Genetics Home Reference (NIH)ATPIF1
Genomic and cartography
GoldenPath hg38 (UCSC)ATPIF1  -     chr1:28236091-28238105 +  1p35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATPIF1  -     1p35.3   [Description]    (hg19-Feb_2009)
EnsemblATPIF1 - 1p35.3 [CytoView hg19]  ATPIF1 - 1p35.3 [CytoView hg38]
Mapping of homologs : NCBIATPIF1 [Mapview hg19]  ATPIF1 [Mapview hg38]
OMIM614981   
Gene and transcription
Genbank (Entrez)AB029042 AF114836 AK000934 AK316600 AL050386
RefSeq transcript (Entrez)NM_016311 NM_178190 NM_178191
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ATPIF1
Cluster EST : UnigeneHs.744914 [ NCBI ]
CGAP (NCI)Hs.744914
Alternative Splicing GalleryENSG00000130770
Gene ExpressionATPIF1 [ NCBI-GEO ]   ATPIF1 [ EBI - ARRAY_EXPRESS ]   ATPIF1 [ SEEK ]   ATPIF1 [ MEM ]
Gene Expression Viewer (FireBrowse)ATPIF1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93974
GTEX Portal (Tissue expression)ATPIF1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UII2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UII2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UII2
Splice isoforms : SwissVarQ9UII2
PhosPhoSitePlusQ9UII2
Domains : Interpro (EBI)ATPase_inhibitor_mt   
Domain families : Pfam (Sanger)IATP (PF04568)   
Domain families : Pfam (NCBI)pfam04568   
Conserved Domain (NCBI)ATPIF1
DMDM Disease mutations93974
Blocks (Seattle)ATPIF1
SuperfamilyQ9UII2
Human Protein AtlasENSG00000130770
Peptide AtlasQ9UII2
HPRD16529
IPIIPI00553153   IPI00377040   IPI00258804   IPI00974236   IPI00976608   
Protein Interaction databases
DIP (DOE-UCLA)Q9UII2
IntAct (EBI)Q9UII2
FunCoupENSG00000130770
BioGRIDATPIF1
STRING (EMBL)ATPIF1
ZODIACATPIF1
Ontologies - Pathways
QuickGOQ9UII2
Ontology : AmiGOangiogenesis  negative regulation of endothelial cell proliferation  enzyme inhibitor activity  calmodulin binding  mitochondrion  mitochondrion  mitochondrial proton-transporting ATP synthase complex  generation of precursor metabolites and energy  heme biosynthetic process  folic acid-containing compound biosynthetic process  cell surface  enzyme binding  erythrocyte differentiation  5-formyltetrahydrofolate cyclo-ligase activity  negative regulation of ATPase activity  tetrahydrofolate interconversion  ATPase inhibitor activity  ATPase inhibitor activity  ATPase inhibitor activity  protein homodimerization activity  protein homodimerization activity  angiostatin binding  ATPase binding  ATPase binding  protein homooligomerization  protein homotetramerization  negative regulation of hydrolase activity  negative regulation of hydrolase activity  mitochondrial depolarization  reactive oxygen species metabolic process  positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  positive regulation of proteolysis involved in cellular protein catabolic process  regulation of protein targeting to mitochondrion  regulation of ATP metabolic process  positive regulation of mitophagy in response to mitochondrial depolarization  
Ontology : EGO-EBIangiogenesis  negative regulation of endothelial cell proliferation  enzyme inhibitor activity  calmodulin binding  mitochondrion  mitochondrion  mitochondrial proton-transporting ATP synthase complex  generation of precursor metabolites and energy  heme biosynthetic process  folic acid-containing compound biosynthetic process  cell surface  enzyme binding  erythrocyte differentiation  5-formyltetrahydrofolate cyclo-ligase activity  negative regulation of ATPase activity  tetrahydrofolate interconversion  ATPase inhibitor activity  ATPase inhibitor activity  ATPase inhibitor activity  protein homodimerization activity  protein homodimerization activity  angiostatin binding  ATPase binding  ATPase binding  protein homooligomerization  protein homotetramerization  negative regulation of hydrolase activity  negative regulation of hydrolase activity  mitochondrial depolarization  reactive oxygen species metabolic process  positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  positive regulation of proteolysis involved in cellular protein catabolic process  regulation of protein targeting to mitochondrion  regulation of ATP metabolic process  positive regulation of mitophagy in response to mitochondrial depolarization  
NDEx NetworkATPIF1
Atlas of Cancer Signalling NetworkATPIF1
Wikipedia pathwaysATPIF1
Orthology - Evolution
OrthoDB93974
GeneTree (enSembl)ENSG00000130770
Phylogenetic Trees/Animal Genes : TreeFamATPIF1
HOVERGENQ9UII2
HOGENOMQ9UII2
Homologs : HomoloGeneATPIF1
Homology/Alignments : Family Browser (UCSC)ATPIF1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerATPIF1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ATPIF1
dbVarATPIF1
ClinVarATPIF1
1000_GenomesATPIF1 
Exome Variant ServerATPIF1
ExAC (Exome Aggregation Consortium)ATPIF1 (select the gene name)
Genetic variants : HAPMAP93974
Genomic Variants (DGV)ATPIF1 [DGVbeta]
DECIPHERATPIF1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisATPIF1 
Mutations
ICGC Data PortalATPIF1 
TCGA Data PortalATPIF1 
Broad Tumor PortalATPIF1
OASIS PortalATPIF1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICATPIF1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDATPIF1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch ATPIF1
DgiDB (Drug Gene Interaction Database)ATPIF1
DoCM (Curated mutations)ATPIF1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ATPIF1 (select a term)
intoGenATPIF1
Cancer3DATPIF1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614981   
Orphanet
MedgenATPIF1
Genetic Testing Registry ATPIF1
NextProtQ9UII2 [Medical]
TSGene93974
GENETestsATPIF1
Target ValidationATPIF1
Huge Navigator ATPIF1 [HugePedia]
snp3D : Map Gene to Disease93974
BioCentury BCIQATPIF1
ClinGenATPIF1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93974
Chemical/Pharm GKB GenePA25173
Clinical trialATPIF1
Miscellaneous
canSAR (ICR)ATPIF1 (select the gene name)
Probes
Litterature
PubMed48 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATPIF1
EVEXATPIF1
GoPubMedATPIF1
iHOPATPIF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:25:01 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.