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AUNIP (aurora kinase A and ninein interacting protein)

Identity

Alias_namesC1orf135
chromosome 1 open reading frame 135
Alias_symbol (synonym)MGC2603
AIBp
Other aliasAIBP
HGNC (Hugo) AUNIP
LocusID (NCBI) 79000
Atlas_Id 52048
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 25831913 and ends at 25859458 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
AUNIP (1p36.11) / PADI1 (1p36.13)SRRM1 (1p36.11) / AUNIP (1p36.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AUNIP   28363
Cards
Entrez_Gene (NCBI)AUNIP  79000  aurora kinase A and ninein interacting protein
AliasesAIBP; C1orf135
GeneCards (Weizmann)AUNIP
Ensembl hg19 (Hinxton)ENSG00000127423 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127423 [Gene_View]  chr1:25831913-25859458 [Contig_View]  AUNIP [Vega]
ICGC DataPortalENSG00000127423
TCGA cBioPortalAUNIP
AceView (NCBI)AUNIP
Genatlas (Paris)AUNIP
WikiGenes79000
SOURCE (Princeton)AUNIP
Genetics Home Reference (NIH)AUNIP
Genomic and cartography
GoldenPath hg38 (UCSC)AUNIP  -     chr1:25831913-25859458 -  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AUNIP  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblAUNIP - 1p36.11 [CytoView hg19]  AUNIP - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBIAUNIP [Mapview hg19]  AUNIP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI198661 AK024326 AK223419 BC000209 BF987554
RefSeq transcript (Entrez)NM_001287490 NM_024037
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AUNIP
Cluster EST : UnigeneHs.725400 [ NCBI ]
CGAP (NCI)Hs.725400
Alternative Splicing GalleryENSG00000127423
Gene ExpressionAUNIP [ NCBI-GEO ]   AUNIP [ EBI - ARRAY_EXPRESS ]   AUNIP [ SEEK ]   AUNIP [ MEM ]
Gene Expression Viewer (FireBrowse)AUNIP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79000
GTEX Portal (Tissue expression)AUNIP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7T9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H7T9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H7T9
Splice isoforms : SwissVarQ9H7T9
PhosPhoSitePlusQ9H7T9
Domains : Interpro (EBI)AUNIP   
Domain families : Pfam (Sanger)AIB (PF15334)   
Domain families : Pfam (NCBI)pfam15334   
Conserved Domain (NCBI)AUNIP
DMDM Disease mutations79000
Blocks (Seattle)AUNIP
SuperfamilyQ9H7T9
Human Protein AtlasENSG00000127423
Peptide AtlasQ9H7T9
HPRD08323
IPIIPI01010947   IPI00031525   
Protein Interaction databases
DIP (DOE-UCLA)Q9H7T9
IntAct (EBI)Q9H7T9
FunCoupENSG00000127423
BioGRIDAUNIP
STRING (EMBL)AUNIP
ZODIACAUNIP
Ontologies - Pathways
QuickGOQ9H7T9
Ontology : AmiGOspindle pole  protein binding  cytoplasm  centrosome  spindle organization  
Ontology : EGO-EBIspindle pole  protein binding  cytoplasm  centrosome  spindle organization  
NDEx NetworkAUNIP
Atlas of Cancer Signalling NetworkAUNIP
Wikipedia pathwaysAUNIP
Orthology - Evolution
OrthoDB79000
GeneTree (enSembl)ENSG00000127423
Phylogenetic Trees/Animal Genes : TreeFamAUNIP
HOVERGENQ9H7T9
HOGENOMQ9H7T9
Homologs : HomoloGeneAUNIP
Homology/Alignments : Family Browser (UCSC)AUNIP
Gene fusions - Rearrangements
Fusion : MitelmanAUNIP/PADI1 [1p36.11/1p36.13]  
Fusion : MitelmanSRRM1/AUNIP [1p36.11/1p36.11]  [t(1;1)(p36;p36)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAUNIP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AUNIP
dbVarAUNIP
ClinVarAUNIP
1000_GenomesAUNIP 
Exome Variant ServerAUNIP
ExAC (Exome Aggregation Consortium)AUNIP (select the gene name)
Genetic variants : HAPMAP79000
Genomic Variants (DGV)AUNIP [DGVbeta]
DECIPHERAUNIP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAUNIP 
Mutations
ICGC Data PortalAUNIP 
TCGA Data PortalAUNIP 
Broad Tumor PortalAUNIP
OASIS PortalAUNIP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAUNIP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAUNIP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AUNIP
DgiDB (Drug Gene Interaction Database)AUNIP
DoCM (Curated mutations)AUNIP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AUNIP (select a term)
intoGenAUNIP
Cancer3DAUNIP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenAUNIP
Genetic Testing Registry AUNIP
NextProtQ9H7T9 [Medical]
TSGene79000
GENETestsAUNIP
Target ValidationAUNIP
Huge Navigator AUNIP [HugePedia]
snp3D : Map Gene to Disease79000
BioCentury BCIQAUNIP
ClinGenAUNIP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79000
Chemical/Pharm GKB GenePA142672453
Clinical trialAUNIP
Miscellaneous
canSAR (ICR)AUNIP (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAUNIP
EVEXAUNIP
GoPubMedAUNIP
iHOPAUNIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:25:03 CEST 2017

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