Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

AVP (arginine vasopressin)

Identity

Other namesADH
ARVP
AVP-NPII
AVRP
VP
HGNC (Hugo) AVP
LocusID (NCBI) 551
Location 20p13
Location_base_pair Starts at 3063202 and ends at 3065370 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)AVP   894
Cards
Entrez_Gene (NCBI)AVP  551  arginine vasopressin
GeneCards (Weizmann)AVP
Ensembl hg19 (Hinxton)ENSG00000101200 [Gene_View]  chr20:3063202-3065370 [Contig_View]  AVP [Vega]
Ensembl hg38 (Hinxton)ENSG00000101200 [Gene_View]  chr20:3063202-3065370 [Contig_View]  AVP [Vega]
ICGC DataPortalENSG00000101200
cBioPortalAVP
AceView (NCBI)AVP
Genatlas (Paris)AVP
WikiGenes551
SOURCE (Princeton)AVP
Genomic and cartography
GoldenPath hg19 (UCSC)AVP  -     chr20:3063202-3065370 -  20p13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)AVP  -     20p13   [Description]    (hg38-Dec_2013)
EnsemblAVP - 20p13 [CytoView hg19]  AVP - 20p13 [CytoView hg38]
Mapping of homologs : NCBIAVP [Mapview hg19]  AVP [Mapview hg38]
OMIM125700   192340   
Gene and transcription
Genbank (Entrez)AF031475 AF031476 AI478178 BC018062 BC126196
RefSeq transcript (Entrez)NM_000490
RefSeq genomic (Entrez)AC_000152 NC_000020 NC_018931 NG_008663 NT_011387 NW_001838652 NW_004929416
Consensus coding sequences : CCDS (NCBI)AVP
Cluster EST : UnigeneHs.89648 [ NCBI ]
CGAP (NCI)Hs.89648
Alternative Splicing : Fast-db (Paris)GSHG0018964
Alternative Splicing GalleryENSG00000101200
Gene ExpressionAVP [ NCBI-GEO ]     AVP [ SEEK ]   AVP [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP01185 (Uniprot)
NextProtP01185  [Medical]
With graphics : InterProP01185
Splice isoforms : SwissVarP01185 (Swissvar)
Domaine pattern : Prosite (Expaxy)NEUROHYPOPHYS_HORM (PS00264)   
Domains : Interpro (EBI)Neurhyp_horm    Neurohypophysial_hormone_CS   
Related proteins : CluSTrP01185
Domain families : Pfam (Sanger)Hormone_4 (PF00220)    Hormone_5 (PF00184)   
Domain families : Pfam (NCBI)pfam00220    pfam00184   
Domain families : Smart (EMBL)NH (SM00003)  
Domain structure : Prodom (Prabi Lyon)Neurhyp_horm (PD001676)   
DMDM Disease mutations551
Blocks (Seattle)P01185
Human Protein AtlasENSG00000101200
Peptide AtlasP01185
HPRD01891
IPIIPI00873080   IPI00921296   
Protein Interaction databases
DIP (DOE-UCLA)P01185
IntAct (EBI)P01185
FunCoupENSG00000101200
BioGRIDAVP
IntegromeDBAVP
STRING (EMBL)AVP
Ontologies - Pathways
QuickGOP01185
Ontology : AmiGOmaternal aggressive behavior  positive regulation of systemic arterial blood pressure  protein kinase activity  signal transducer activity  receptor binding  neuropeptide hormone activity  neurohypophyseal hormone activity  extracellular region  extracellular space  cytosol  generation of precursor metabolites and energy  protein phosphorylation  water transport  signal transduction  positive regulation of cytosolic calcium ion concentration  cell-cell signaling  negative regulation of female receptivity  grooming behavior  locomotory behavior  positive regulation of cell proliferation  positive regulation of gene expression  positive regulation of glutamate secretion  secretory granule  positive regulation of cell growth  dendrite  positive regulation of cAMP biosynthetic process  positive regulation of prostaglandin biosynthetic process  V1A vasopressin receptor binding  V1B vasopressin receptor binding  positive regulation of cellular pH reduction  positive regulation of peptidyl-serine phosphorylation  response to testosterone  response to nicotine  social behavior  regulation of renal sodium excretion  vasoconstriction  hyperosmotic salinity response  maternal behavior  cysteine-type endopeptidase inhibitor activity involved in apoptotic process  negative regulation of apoptotic process  penile erection  negative regulation of cysteine-type endopeptidase activity involved in apoptotic process  sodium-independent organic anion transport  response to ethanol  positive regulation of vasoconstriction  multicellular organismal water homeostasis  negative regulation of transmission of nerve impulse  transmembrane transport  ERK1 and ERK2 cascade  protein kinase C signaling  negative regulation of release of cytochrome c from mitochondria  
Ontology : EGO-EBImaternal aggressive behavior  positive regulation of systemic arterial blood pressure  protein kinase activity  signal transducer activity  receptor binding  neuropeptide hormone activity  neurohypophyseal hormone activity  extracellular region  extracellular space  cytosol  generation of precursor metabolites and energy  protein phosphorylation  water transport  signal transduction  positive regulation of cytosolic calcium ion concentration  cell-cell signaling  negative regulation of female receptivity  grooming behavior  locomotory behavior  positive regulation of cell proliferation  positive regulation of gene expression  positive regulation of glutamate secretion  secretory granule  positive regulation of cell growth  dendrite  positive regulation of cAMP biosynthetic process  positive regulation of prostaglandin biosynthetic process  V1A vasopressin receptor binding  V1B vasopressin receptor binding  positive regulation of cellular pH reduction  positive regulation of peptidyl-serine phosphorylation  response to testosterone  response to nicotine  social behavior  regulation of renal sodium excretion  vasoconstriction  hyperosmotic salinity response  maternal behavior  cysteine-type endopeptidase inhibitor activity involved in apoptotic process  negative regulation of apoptotic process  penile erection  negative regulation of cysteine-type endopeptidase activity involved in apoptotic process  sodium-independent organic anion transport  response to ethanol  positive regulation of vasoconstriction  multicellular organismal water homeostasis  negative regulation of transmission of nerve impulse  transmembrane transport  ERK1 and ERK2 cascade  protein kinase C signaling  negative regulation of release of cytochrome c from mitochondria  
Pathways : BIOCARTAControl of skeletal myogenesis by HDAC & calcium/calmodulin-dependent kinase (CaMK) [Genes]   
Pathways : KEGGVasopressin-regulated water reabsorption   
Protein Interaction DatabaseAVP
DoCM (Curated mutations)AVP
Wikipedia pathwaysAVP
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerAVP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AVP
dbVarAVP
ClinVarAVP
1000_GenomesAVP 
Exome Variant ServerAVP
SNP (GeneSNP Utah)AVP
SNP : HGBaseAVP
Genetic variants : HAPMAPAVP
Genomic VariantsAVP  AVP [DGVbeta]
Mutations
ICGC Data PortalENSG00000101200 
Somatic Mutations in Cancer : COSMICAVP 
CONAN: Copy Number AnalysisAVP 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)nndi
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)20:3063202-3065370
Mutations and Diseases : HGMDAVP
OMIM125700    192340   
MedgenAVP
NextProtP01185 [Medical]
GENETestsAVP
Disease Genetic AssociationAVP
Huge Navigator AVP [HugePedia]  AVP [HugeCancerGEM]
snp3D : Map Gene to Disease551
DGIdb (Drug Gene Interaction db)AVP
General knowledge
Homologs : HomoloGeneAVP
Homology/Alignments : Family Browser (UCSC)AVP
Phylogenetic Trees/Animal Genes : TreeFamAVP
Chemical/Protein Interactions : CTD551
Chemical/Pharm GKB GenePA25186
Clinical trialAVP
Cancer Resource (Charite)ENSG00000101200
Other databases
Probes
Litterature
PubMed160 Pubmed reference(s) in Entrez
CoreMineAVP
GoPubMedAVP
iHOPAVP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2014Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 20 20:19:15 CET 2014

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.