Atlas of Genetics and Cytogenetics in Oncology and Haematology


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AZF1 (azoospermia factor 1)

Identity

Alias (NCBI)AZF
AZFA
SP3
HGNC (Hugo) -
HGNC Alias symbAZFa
HGNC Previous nameAZF
LocusID (NCBI) 560
Atlas_Id 52909
Location Yq11  [Link to chromosome band Yq11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)AZF1  560  azoospermia factor 1
AliasesAZF; AZFA; SP3
GeneCards (Weizmann)AZF1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  AZF1 [Vega]
TCGA cBioPortalAZF1
AceView (NCBI)AZF1
Genatlas (Paris)AZF1
WikiGenes560
SOURCE (Princeton)AZF1
Genetics Home Reference (NIH)AZF1
Genomic and cartography
GoldenPath hg38 (UCSC)AZF1  -  
GoldenPath hg19 (UCSC)AZF1  -  
GoldenPathAZF1 - [CytoView hg19]  AZF1 - [CytoView hg38]
genome Data Viewer NCBIAZF1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AZF1
Gene ExpressionAZF1 [ NCBI-GEO ]   AZF1 [ EBI - ARRAY_EXPRESS ]   AZF1 [ SEEK ]   AZF1 [ MEM ]
Gene Expression Viewer (FireBrowse)AZF1 [ Firebrowse - Broad ]
GenevisibleExpression of AZF1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)560
GTEX Portal (Tissue expression)AZF1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AZF1
DMDM Disease mutations560
Blocks (Seattle)AZF1
Protein Interaction databases
BioGRIDAZF1
STRING (EMBL)AZF1
ZODIACAZF1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease560
BioCentury BCIQAZF1
ClinGenAZF1
Clinical trials, drugs, therapy
Protein Interactions : CTD560
Pharm GKB GenePA25201
Clinical trialAZF1
Miscellaneous
canSAR (ICR)AZF1 (select the gene name)
HarmonizomeAZF1
DataMed IndexAZF1
Probes
Litterature
PubMed53 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAZF1
EVEXAZF1
GoPubMedAZF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:04:29 CEST 2020

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