Atlas of Genetics and Cytogenetics in Oncology and Haematology


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AZI2 (5-azacytidine induced 2)

Identity

Alias_symbol (synonym)NAP1
FLJ21939
AZ2
Other aliasTILP
HGNC (Hugo) AZI2
LocusID (NCBI) 64343
Atlas_Id 54892
Location 3p24.1  [Link to chromosome band 3p24]
Location_base_pair Starts at 28373180 and ends at 28390618 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CMC1 (3p24.1) / AZI2 (3p24.1)ITGA5 (12q13.13) / AZI2 (3p24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AZI2   24002
Cards
Entrez_Gene (NCBI)AZI2  64343  5-azacytidine induced 2
AliasesAZ2; NAP1; TILP
GeneCards (Weizmann)AZI2
Ensembl hg19 (Hinxton)ENSG00000163512 [Gene_View]  chr3:28373180-28390618 [Contig_View]  AZI2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000163512 [Gene_View]  chr3:28373180-28390618 [Contig_View]  AZI2 [Vega]
ICGC DataPortalENSG00000163512
TCGA cBioPortalAZI2
AceView (NCBI)AZI2
Genatlas (Paris)AZI2
WikiGenes64343
SOURCE (Princeton)AZI2
Genetics Home Reference (NIH)AZI2
Genomic and cartography
GoldenPath hg19 (UCSC)AZI2  -     chr3:28373180-28390618 -  3p24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)AZI2  -     3p24.1   [Description]    (hg38-Dec_2013)
EnsemblAZI2 - 3p24.1 [CytoView hg19]  AZI2 - 3p24.1 [CytoView hg38]
Mapping of homologs : NCBIAZI2 [Mapview hg19]  AZI2 [Mapview hg38]
OMIM609916   
Gene and transcription
Genbank (Entrez)AK025592 AK290637 AY151386 BC001139 BC001853
RefSeq transcript (Entrez)NM_001134432 NM_001134433 NM_001271650 NM_022461
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_022517 NW_004929309
Consensus coding sequences : CCDS (NCBI)AZI2
Cluster EST : UnigeneHs.706676 [ NCBI ]
CGAP (NCI)Hs.706676
Alternative Splicing GalleryENSG00000163512
Gene ExpressionAZI2 [ NCBI-GEO ]   AZI2 [ EBI - ARRAY_EXPRESS ]   AZI2 [ SEEK ]   AZI2 [ MEM ]
Gene Expression Viewer (FireBrowse)AZI2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64343
GTEX Portal (Tissue expression)AZI2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H6S1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H6S1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H6S1
Splice isoforms : SwissVarQ9H6S1
PhosPhoSitePlusQ9H6S1
Domains : Interpro (EBI)TBD   
Domain families : Pfam (Sanger)TBD (PF12845)   
Domain families : Pfam (NCBI)pfam12845   
Conserved Domain (NCBI)AZI2
DMDM Disease mutations64343
Blocks (Seattle)AZI2
SuperfamilyQ9H6S1
Human Protein AtlasENSG00000163512
Peptide AtlasQ9H6S1
HPRD10577
IPIIPI00008255   IPI00952575   IPI00924649   IPI00925995   IPI00384383   IPI00925152   IPI01015404   
Protein Interaction databases
DIP (DOE-UCLA)Q9H6S1
IntAct (EBI)Q9H6S1
FunCoupENSG00000163512
BioGRIDAZI2
STRING (EMBL)AZI2
ZODIACAZI2
Ontologies - Pathways
QuickGOQ9H6S1
Ontology : AmiGOmitotic cell cycle  protein binding  cytoplasm  I-kappaB kinase/NF-kappaB signaling  interferon-alpha production  interferon-gamma production  interleukin-6 production  tumor necrosis factor production  T cell activation  dendritic cell proliferation  dendritic cell differentiation  
Ontology : EGO-EBImitotic cell cycle  protein binding  cytoplasm  I-kappaB kinase/NF-kappaB signaling  interferon-alpha production  interferon-gamma production  interleukin-6 production  tumor necrosis factor production  T cell activation  dendritic cell proliferation  dendritic cell differentiation  
Pathways : KEGGRIG-I-like receptor signaling pathway   
NDEx NetworkAZI2
Atlas of Cancer Signalling NetworkAZI2
Wikipedia pathwaysAZI2
Orthology - Evolution
OrthoDB64343
GeneTree (enSembl)ENSG00000163512
Phylogenetic Trees/Animal Genes : TreeFamAZI2
HOVERGENQ9H6S1
HOGENOMQ9H6S1
Homologs : HomoloGeneAZI2
Homology/Alignments : Family Browser (UCSC)AZI2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAZI2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AZI2
dbVarAZI2
ClinVarAZI2
1000_GenomesAZI2 
Exome Variant ServerAZI2
ExAC (Exome Aggregation Consortium)AZI2 (select the gene name)
Genetic variants : HAPMAP64343
Genomic Variants (DGV)AZI2 [DGVbeta]
DECIPHER (Syndromes)3:28373180-28390618  ENSG00000163512
CONAN: Copy Number AnalysisAZI2 
Mutations
ICGC Data PortalAZI2 
TCGA Data PortalAZI2 
Broad Tumor PortalAZI2
OASIS PortalAZI2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAZI2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAZI2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AZI2
DgiDB (Drug Gene Interaction Database)AZI2
DoCM (Curated mutations)AZI2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AZI2 (select a term)
intoGenAZI2
Cancer3DAZI2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609916   
Orphanet
MedgenAZI2
Genetic Testing Registry AZI2
NextProtQ9H6S1 [Medical]
TSGene64343
GENETestsAZI2
Huge Navigator AZI2 [HugePedia]
snp3D : Map Gene to Disease64343
BioCentury BCIQAZI2
ClinGenAZI2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64343
Chemical/Pharm GKB GenePA134950985
Clinical trialAZI2
Miscellaneous
canSAR (ICR)AZI2 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAZI2
EVEXAZI2
GoPubMedAZI2
iHOPAZI2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:53:36 CEST 2017

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