B4GALT5 (UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5)

Identity

Other names	B4Gal-T5
	BETA4-GALT-IV
	MGC138470
	beta4Gal-T5
	beta4GalT-V
	gt-V
HGNC	B4GALT5
Location	20q13.1-q13.2
Location_base_pair	Starts at 47682890 and ends at 47763828 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	B4GALT5   928
Entrez_Gene	B4GALT5  9334  UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
	Cards
GeneCards	B4GALT5
Ensembl	B4GALT5 [Search_View]   ENSG00000158470 [Gene_View]
Genatlas	B4GALT5
GeneLynx	B4GALT5
eGenome	B4GALT5
euGene	9334
	Genomic and cartography
GoldenPath	B4GALT5  -     chr20:47682890-47763828 -  20q13.13   [Description]    (hg18-March_2006)
Ensembl	B4GALT5 - 20q13.13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	B4GALT5
	Gene and transcription
Genbank	AB004550 [ ENTREZ ]
Genbank	AF038663 [ ENTREZ ]
Genbank	AF289556 [ ENTREZ ]
Genbank	AK054803 [ ENTREZ ]
Genbank	AK056333 [ ENTREZ ]
RefSeq	NM_004776 [ SRS ]    NM_004776 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_011362 [ SRS ]    NT_011362 [ ENTREZ ]
RefSeq	NW_001838666 [ SRS ]    NW_001838666 [ ENTREZ ]
RefSeq	NW_927339 [ SRS ]    NW_927339 [ ENTREZ ]
AceView	B4GALT5 AceView - NCBI
Unigene	Hs.370487 [ SRS ]    Hs.370487 [ NCBI ]     HS370487 [ spliceNest ]
Fast-db	13323 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O43286 [ SRS]    O43286 [ EXPASY ]     O43286 [ INTERPRO ]     O43286 [ UNIPROT ]
Interpro	IPR003859 Galactosyl_T_2 [ SRS ]    IPR003859 Galactosyl_T_2 [ EBI ]
CluSTr	O43286
Pfam	PF02709 Galactosyl_T_2 [ SRS ]    PF02709 Galactosyl_T_2 [ Sanger ]    pfam02709 [ NCBI-CDD ]
Blocks	O43286
HPRD	06807
	Protein Interaction databases
DIP	O43286
IntAct	O43286
	Polymorphism : SNP, mutations, diseases
OMIM	604016    [ map ]
GENECLINICS	604016
SNP	B4GALT5 [dbSNP-NCBI]
SNP	NM_004776 [SNP-NCI]
SNP	B4GALT5 [GeneSNPs - Utah]  B4GALT5] [HGBASE - SRS]
HAPMAP	B4GALT5 [HAPMAP]
HGMD	B4GALT5
	General knowledge
Family Browser	B4GALT5 [UCSC Family Browser]
SOURCE	NM_004776
SMD	Hs.370487
SAGE	Hs.370487
Enzyme	2.4.1.- [ Enzyme-Expasy ]   2.4.1.- [ Enzyme-SRS ]   2.4.1.- [ IntEnz-EBI ]   2.4.1.- [ BRENDA ]   2.4.1.- [ KEGG ]   2.4.1.- [ WIT ]
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	carbohydrate metabolic process [Amigo]  carbohydrate metabolic process
GO	galactosyltransferase activity [Amigo]  galactosyltransferase activity
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	transferase activity, transferring glycosyl groups [Amigo]  transferase activity, transferring glycosyl groups
GO	manganese ion binding [Amigo]  manganese ion binding
GO	metal ion binding [Amigo]  metal ion binding
KEGG	N-Glycan biosynthesis
KEGG	Keratan sulfate biosynthesis
KEGG	Glycan structures - biosynthesis 1
PubGene	B4GALT5
TreeFam	B4GALT5
CTD	9334 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	B4GALT5 Related clones (RZPD - Berlin)
	PubMed
PubMed	14 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:04:21 2008