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BAAT (bile acid CoA:amino acid N-acyltransferase)

Identity

Alias_namesbile acid Coenzyme A:amino acid N-acyltransferase (glycine N-choloyltransferase)
bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
Alias_symbol (synonym)BAT
Other aliasBACAT
HGNC (Hugo) BAAT
LocusID (NCBI) 570
Atlas_Id 60695
Location 9q31.1  [Link to chromosome band 9q31]
Location_base_pair Starts at 104122699 and ends at 104145801 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ZNF189 (9q31.1) / BAAT (9q31.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BAAT   932
Cards
Entrez_Gene (NCBI)BAAT  570  bile acid CoA:amino acid N-acyltransferase
AliasesBACAT; BAT
GeneCards (Weizmann)BAAT
Ensembl hg19 (Hinxton)ENSG00000136881 [Gene_View]  chr9:104122699-104145801 [Contig_View]  BAAT [Vega]
Ensembl hg38 (Hinxton)ENSG00000136881 [Gene_View]  chr9:104122699-104145801 [Contig_View]  BAAT [Vega]
ICGC DataPortalENSG00000136881
TCGA cBioPortalBAAT
AceView (NCBI)BAAT
Genatlas (Paris)BAAT
WikiGenes570
SOURCE (Princeton)BAAT
Genetics Home Reference (NIH)BAAT
Genomic and cartography
GoldenPath hg19 (UCSC)BAAT  -     chr9:104122699-104145801 -  9q31.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BAAT  -     9q31.1   [Description]    (hg38-Dec_2013)
EnsemblBAAT - 9q31.1 [CytoView hg19]  BAAT - 9q31.1 [CytoView hg38]
Mapping of homologs : NCBIBAAT [Mapview hg19]  BAAT [Mapview hg38]
OMIM602938   607748   
Gene and transcription
Genbank (Entrez)AK315347 BC009567 BC039200 BC107424 BG565737
RefSeq transcript (Entrez)NM_001127610 NM_001701
RefSeq genomic (Entrez)NC_000009 NC_018920 NG_009774 NT_008470 NT_187578 NW_004929366
Consensus coding sequences : CCDS (NCBI)BAAT
Cluster EST : UnigeneHs.284712 [ NCBI ]
CGAP (NCI)Hs.284712
Alternative Splicing GalleryENSG00000136881
Gene ExpressionBAAT [ NCBI-GEO ]   BAAT [ EBI - ARRAY_EXPRESS ]   BAAT [ SEEK ]   BAAT [ MEM ]
Gene Expression Viewer (FireBrowse)BAAT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)570
GTEX Portal (Tissue expression)BAAT
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14032   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14032  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14032
Splice isoforms : SwissVarQ14032
Catalytic activity : Enzyme2.3.1.65 [ Enzyme-Expasy ]   2.3.1.652.3.1.65 [ IntEnz-EBI ]   2.3.1.65 [ BRENDA ]   2.3.1.65 [ KEGG ]   
PhosPhoSitePlusQ14032
Domains : Interpro (EBI)AB_hydrolase    Acyl-CoA_thioEstase_long-chain    BAAT_C    Thio_Ohase/aa_AcTrfase   
Domain families : Pfam (Sanger)BAAT_C (PF08840)    Bile_Hydr_Trans (PF04775)   
Domain families : Pfam (NCBI)pfam08840    pfam04775   
Conserved Domain (NCBI)BAAT
DMDM Disease mutations570
Blocks (Seattle)BAAT
SuperfamilyQ14032
Human Protein AtlasENSG00000136881
Peptide AtlasQ14032
HPRD08376
IPIIPI00017819   
Protein Interaction databases
DIP (DOE-UCLA)Q14032
IntAct (EBI)Q14032
FunCoupENSG00000136881
BioGRIDBAAT
STRING (EMBL)BAAT
ZODIACBAAT
Ontologies - Pathways
QuickGOQ14032
Ontology : AmiGOliver development  bile acid conjugation  receptor binding  protein binding  peroxisome  peroxisomal matrix  cytosol  cytosol  glycine metabolic process  fatty acid metabolic process  acyl-CoA metabolic process  bile acid biosynthetic process  bile acid biosynthetic process  bile acid metabolic process  bile acid and bile salt transport  palmitoyl-CoA hydrolase activity  N-acyltransferase activity  taurine metabolic process  organ regeneration  small molecule metabolic process  glycine N-choloyltransferase activity  carboxylic ester hydrolase activity  medium-chain acyl-CoA hydrolase activity  long-chain acyl-CoA hydrolase activity  very long chain acyl-CoA hydrolase activity  
Ontology : EGO-EBIliver development  bile acid conjugation  receptor binding  protein binding  peroxisome  peroxisomal matrix  cytosol  cytosol  glycine metabolic process  fatty acid metabolic process  acyl-CoA metabolic process  bile acid biosynthetic process  bile acid biosynthetic process  bile acid metabolic process  bile acid and bile salt transport  palmitoyl-CoA hydrolase activity  N-acyltransferase activity  taurine metabolic process  organ regeneration  small molecule metabolic process  glycine N-choloyltransferase activity  carboxylic ester hydrolase activity  medium-chain acyl-CoA hydrolase activity  long-chain acyl-CoA hydrolase activity  very long chain acyl-CoA hydrolase activity  
Pathways : BIOCARTAMetabolism of Anandamide, an Endogenous Cannabinoid [Genes]   
Pathways : KEGGPrimary bile acid biosynthesis    Taurine and hypotaurine metabolism    Biosynthesis of unsaturated fatty acids    Peroxisome    Bile secretion   
NDEx NetworkBAAT
Atlas of Cancer Signalling NetworkBAAT
Wikipedia pathwaysBAAT
Orthology - Evolution
OrthoDB570
GeneTree (enSembl)ENSG00000136881
Phylogenetic Trees/Animal Genes : TreeFamBAAT
HOVERGENQ14032
HOGENOMQ14032
Homologs : HomoloGeneBAAT
Homology/Alignments : Family Browser (UCSC)BAAT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBAAT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BAAT
dbVarBAAT
ClinVarBAAT
1000_GenomesBAAT 
Exome Variant ServerBAAT
ExAC (Exome Aggregation Consortium)BAAT (select the gene name)
Genetic variants : HAPMAP570
Genomic Variants (DGV)BAAT [DGVbeta]
DECIPHER (Syndromes)9:104122699-104145801  ENSG00000136881
CONAN: Copy Number AnalysisBAAT 
Mutations
ICGC Data PortalBAAT 
TCGA Data PortalBAAT 
Broad Tumor PortalBAAT
OASIS PortalBAAT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBAAT  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBAAT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BAAT
DgiDB (Drug Gene Interaction Database)BAAT
DoCM (Curated mutations)BAAT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BAAT (select a term)
intoGenBAAT
Cancer3DBAAT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602938    607748   
Orphanet19267   
MedgenBAAT
Genetic Testing Registry BAAT
NextProtQ14032 [Medical]
TSGene570
GENETestsBAAT
Huge Navigator BAAT [HugePedia]
snp3D : Map Gene to Disease570
BioCentury BCIQBAAT
ClinGenBAAT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD570
Chemical/Pharm GKB GenePA25231
Clinical trialBAAT
Miscellaneous
canSAR (ICR)BAAT (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBAAT
EVEXBAAT
GoPubMedBAAT
iHOPBAAT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 11:55:37 CET 2017

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