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BACE1 (beta-secretase 1)

Identity

Alias (NCBI)ASP2
BACE
HSPC104
HGNC (Hugo) BACE1
HGNC Previous nameBACE
HGNC Previous namebeta-site APP-cleaving enzyme
 beta-site APP-cleaving enzyme 1
LocusID (NCBI) 23621
Atlas_Id 54008
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 117285686 and ends at 117316256 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)BACE1   933
Cards
Entrez_Gene (NCBI)BACE1    beta-secretase 1
AliasesASP2; BACE; HSPC104
GeneCards (Weizmann)BACE1
Ensembl hg19 (Hinxton)ENSG00000186318 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186318 [Gene_View]  ENSG00000186318 [Sequence]  chr11:117285686-117316256 [Contig_View]  BACE1 [Vega]
ICGC DataPortalENSG00000186318
TCGA cBioPortalBACE1
AceView (NCBI)BACE1
Genatlas (Paris)BACE1
SOURCE (Princeton)BACE1
Genetics Home Reference (NIH)BACE1
Genomic and cartography
GoldenPath hg38 (UCSC)BACE1  -     chr11:117285686-117316256 -  11q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BACE1  -     11q23.3   [Description]    (hg19-Feb_2009)
GoldenPathBACE1 - 11q23.3 [CytoView hg19]  BACE1 - 11q23.3 [CytoView hg38]
ImmunoBaseENSG00000186318
genome Data Viewer NCBIBACE1 [Mapview hg19]  
OMIM604252   
Gene and transcription
Genbank (Entrez)AB032975 AB050436 AB050437 AB050438 AB089958
RefSeq transcript (Entrez)NM_001207048 NM_001207049 NM_012104 NM_138971 NM_138972 NM_138973
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BACE1
Alternative Splicing GalleryENSG00000186318
Gene ExpressionBACE1 [ NCBI-GEO ]   BACE1 [ EBI - ARRAY_EXPRESS ]   BACE1 [ SEEK ]   BACE1 [ MEM ]
Gene Expression Viewer (FireBrowse)BACE1 [ Firebrowse - Broad ]
GenevisibleExpression of BACE1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23621
GTEX Portal (Tissue expression)BACE1
Human Protein AtlasENSG00000186318-BACE1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BACE1
Blocks (Seattle)BACE1
Human Protein Atlas [tissue]ENSG00000186318-BACE1 [tissue]
HPRD07255
IPIIPI00011518   IPI00216209   IPI00216210   IPI00216211   IPI00386093   IPI00411567   IPI00968051   IPI00964620   IPI00977638   IPI00979537   IPI00978929   
Protein Interaction databases
BioGRIDBACE1
STRING (EMBL)BACE1
ZODIACBACE1
Ontologies - Pathways
Litterature
PubMed398 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXBACE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:12:24 CET 2021

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