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BAG5 (BCL2 associated athanogene 5)

Identity

Other aliasBAG-5
HGNC (Hugo) BAG5
LocusID (NCBI) 9529
Atlas_Id 43161
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 103556544 and ends at 103562814 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MARK3 (14q32.32) / BAG5 (14q32.33)MARK3 14q32.32 / BAG5 14q32.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BAG5   941
Cards
Entrez_Gene (NCBI)BAG5  9529  BCL2 associated athanogene 5
AliasesBAG-5
GeneCards (Weizmann)BAG5
Ensembl hg19 (Hinxton)ENSG00000166170 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166170 [Gene_View]  chr14:103556544-103562814 [Contig_View]  BAG5 [Vega]
ICGC DataPortalENSG00000166170
TCGA cBioPortalBAG5
AceView (NCBI)BAG5
Genatlas (Paris)BAG5
WikiGenes9529
SOURCE (Princeton)BAG5
Genetics Home Reference (NIH)BAG5
Genomic and cartography
GoldenPath hg38 (UCSC)BAG5  -     chr14:103556544-103562814 -  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BAG5  -     14q32.33   [Description]    (hg19-Feb_2009)
EnsemblBAG5 - 14q32.33 [CytoView hg19]  BAG5 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBIBAG5 [Mapview hg19]  BAG5 [Mapview hg38]
OMIM603885   
Gene and transcription
Genbank (Entrez)AA481394 AB020680 AB105186 AB362576 AF095195
RefSeq transcript (Entrez)NM_001015048 NM_001015049 NM_004873
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BAG5
Cluster EST : UnigeneHs.5443 [ NCBI ]
CGAP (NCI)Hs.5443
Alternative Splicing GalleryENSG00000166170
Gene ExpressionBAG5 [ NCBI-GEO ]   BAG5 [ EBI - ARRAY_EXPRESS ]   BAG5 [ SEEK ]   BAG5 [ MEM ]
Gene Expression Viewer (FireBrowse)BAG5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9529
GTEX Portal (Tissue expression)BAG5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UL15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UL15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UL15
Splice isoforms : SwissVarQ9UL15
PhosPhoSitePlusQ9UL15
Domaine pattern : Prosite (Expaxy)BAG (PS51035)   
Domains : Interpro (EBI)BAG_domain   
Domain families : Pfam (Sanger)BAG (PF02179)   
Domain families : Pfam (NCBI)pfam02179   
Domain families : Smart (EMBL)BAG (SM00264)  
Conserved Domain (NCBI)BAG5
DMDM Disease mutations9529
Blocks (Seattle)BAG5
PDB (SRS)2D9D    3A8Y   
PDB (PDBSum)2D9D    3A8Y   
PDB (IMB)2D9D    3A8Y   
PDB (RSDB)2D9D    3A8Y   
Structural Biology KnowledgeBase2D9D    3A8Y   
SCOP (Structural Classification of Proteins)2D9D    3A8Y   
CATH (Classification of proteins structures)2D9D    3A8Y   
SuperfamilyQ9UL15
Human Protein AtlasENSG00000166170
Peptide AtlasQ9UL15
HPRD04862
IPIIPI00007731   IPI00556027   IPI01026259   
Protein Interaction databases
DIP (DOE-UCLA)Q9UL15
IntAct (EBI)Q9UL15
FunCoupENSG00000166170
BioGRIDBAG5
STRING (EMBL)BAG5
ZODIACBAG5
Ontologies - Pathways
QuickGOQ9UL15
Ontology : AmiGOadenyl-nucleotide exchange factor activity  protein binding  nucleus  mitochondrion  cytosol  cytosol  protein folding  Golgi organization  negative regulation of neuron projection development  membrane  inclusion body  protein kinase binding  negative regulation of protein ubiquitination  negative regulation of protein ubiquitination  ubiquitin protein ligase binding  ubiquitin protein ligase binding  negative regulation of proteasomal ubiquitin-dependent protein catabolic process  perinuclear region of cytoplasm  chaperone binding  regulation of ubiquitin-protein transferase activity  negative regulation of ubiquitin-protein transferase activity  negative regulation of protein refolding  neuron death  regulation of inclusion body assembly  regulation of cellular response to heat  negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway  
Ontology : EGO-EBIadenyl-nucleotide exchange factor activity  protein binding  nucleus  mitochondrion  cytosol  cytosol  protein folding  Golgi organization  negative regulation of neuron projection development  membrane  inclusion body  protein kinase binding  negative regulation of protein ubiquitination  negative regulation of protein ubiquitination  ubiquitin protein ligase binding  ubiquitin protein ligase binding  negative regulation of proteasomal ubiquitin-dependent protein catabolic process  perinuclear region of cytoplasm  chaperone binding  regulation of ubiquitin-protein transferase activity  negative regulation of ubiquitin-protein transferase activity  negative regulation of protein refolding  neuron death  regulation of inclusion body assembly  regulation of cellular response to heat  negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway  
NDEx NetworkBAG5
Atlas of Cancer Signalling NetworkBAG5
Wikipedia pathwaysBAG5
Orthology - Evolution
OrthoDB9529
GeneTree (enSembl)ENSG00000166170
Phylogenetic Trees/Animal Genes : TreeFamBAG5
HOVERGENQ9UL15
HOGENOMQ9UL15
Homologs : HomoloGeneBAG5
Homology/Alignments : Family Browser (UCSC)BAG5
Gene fusions - Rearrangements
Fusion : MitelmanMARK3/BAG5 [14q32.32/14q32.33]  [t(14;14)(q32;q32)]  
Fusion: TCGAMARK3 14q32.32 BAG5 14q32.33 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBAG5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BAG5
dbVarBAG5
ClinVarBAG5
1000_GenomesBAG5 
Exome Variant ServerBAG5
ExAC (Exome Aggregation Consortium)BAG5 (select the gene name)
Genetic variants : HAPMAP9529
Genomic Variants (DGV)BAG5 [DGVbeta]
DECIPHERBAG5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBAG5 
Mutations
ICGC Data PortalBAG5 
TCGA Data PortalBAG5 
Broad Tumor PortalBAG5
OASIS PortalBAG5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBAG5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBAG5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BAG5
DgiDB (Drug Gene Interaction Database)BAG5
DoCM (Curated mutations)BAG5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BAG5 (select a term)
intoGenBAG5
Cancer3DBAG5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603885   
Orphanet
MedgenBAG5
Genetic Testing Registry BAG5
NextProtQ9UL15 [Medical]
TSGene9529
GENETestsBAG5
Target ValidationBAG5
Huge Navigator BAG5 [HugePedia]
snp3D : Map Gene to Disease9529
BioCentury BCIQBAG5
ClinGenBAG5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9529
Chemical/Pharm GKB GenePA25241
Clinical trialBAG5
Miscellaneous
canSAR (ICR)BAG5 (select the gene name)
Probes
Litterature
PubMed46 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBAG5
EVEXBAG5
GoPubMedBAG5
iHOPBAG5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:55:54 CEST 2017

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