Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BAIAP2L2 (BAI1-associated protein 2-like 2)

Identity

Alias_namesBAI1-associated protein 2-like 2
Alias_symbol (synonym)FLJ22582
pinkbar
Other alias-
HGNC (Hugo) BAIAP2L2
LocusID (NCBI) 80115
Atlas_Id 60701
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 38480896 and ends at 38506676 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BAIAP2L2 (22q13.1) / PLA2G6 (22q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BAIAP2L2   26203
Cards
Entrez_Gene (NCBI)BAIAP2L2  80115  BAI1-associated protein 2-like 2
Aliases
GeneCards (Weizmann)BAIAP2L2
Ensembl hg19 (Hinxton)ENSG00000128298 [Gene_View]  chr22:38480896-38506676 [Contig_View]  BAIAP2L2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000128298 [Gene_View]  chr22:38480896-38506676 [Contig_View]  BAIAP2L2 [Vega]
ICGC DataPortalENSG00000128298
TCGA cBioPortalBAIAP2L2
AceView (NCBI)BAIAP2L2
Genatlas (Paris)BAIAP2L2
WikiGenes80115
SOURCE (Princeton)BAIAP2L2
Genetics Home Reference (NIH)BAIAP2L2
Genomic and cartography
GoldenPath hg19 (UCSC)BAIAP2L2  -     chr22:38480896-38506676 -  22q13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BAIAP2L2  -     22q13.1   [Description]    (hg38-Dec_2013)
EnsemblBAIAP2L2 - 22q13.1 [CytoView hg19]  BAIAP2L2 - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBIBAIAP2L2 [Mapview hg19]  BAIAP2L2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026235 AK026263 AW007403 AY358164 JF432802
RefSeq transcript (Entrez)NM_025045
RefSeq genomic (Entrez)NC_000022 NC_018933 NG_033059 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)BAIAP2L2
Cluster EST : UnigeneHs.474822 [ NCBI ]
CGAP (NCI)Hs.474822
Alternative Splicing GalleryENSG00000128298
Gene ExpressionBAIAP2L2 [ NCBI-GEO ]   BAIAP2L2 [ EBI - ARRAY_EXPRESS ]   BAIAP2L2 [ SEEK ]   BAIAP2L2 [ MEM ]
Gene Expression Viewer (FireBrowse)BAIAP2L2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80115
GTEX Portal (Tissue expression)BAIAP2L2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXY1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXY1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXY1
Splice isoforms : SwissVarQ6UXY1
PhosPhoSitePlusQ6UXY1
Domaine pattern : Prosite (Expaxy)IMD (PS51338)    SH3 (PS50002)   
Domains : Interpro (EBI)I-BAR_dom    IRSp53/IRTKS/Pinkbar    Pinkbar    SH3_domain   
Domain families : Pfam (Sanger)IMD (PF08397)    SH3_9 (PF14604)   
Domain families : Pfam (NCBI)pfam08397    pfam14604   
Domain families : Smart (EMBL)SH3 (SM00326)  
Conserved Domain (NCBI)BAIAP2L2
DMDM Disease mutations80115
Blocks (Seattle)BAIAP2L2
SuperfamilyQ6UXY1
Human Protein AtlasENSG00000128298
Peptide AtlasQ6UXY1
HPRD07997
IPIIPI00059940   IPI00746115   IPI00889779   IPI00396288   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXY1
IntAct (EBI)Q6UXY1
FunCoupENSG00000128298
BioGRIDBAIAP2L2
STRING (EMBL)BAIAP2L2
ZODIACBAIAP2L2
Ontologies - Pathways
QuickGOQ6UXY1
Ontology : AmiGOphospholipid binding  nucleoplasm  cytosol  plasma membrane  plasma membrane organization  cytoskeletal adaptor activity  insulin receptor signaling pathway  vesicle membrane  actin cytoskeleton  cytoplasmic vesicle membrane  positive regulation of actin filament polymerization  cell-cell contact zone  actin filament bundle assembly  actin crosslink formation  membrane organization  clathrin complex  positive regulation of actin cytoskeleton reorganization  
Ontology : EGO-EBIphospholipid binding  nucleoplasm  cytosol  plasma membrane  plasma membrane organization  cytoskeletal adaptor activity  insulin receptor signaling pathway  vesicle membrane  actin cytoskeleton  cytoplasmic vesicle membrane  positive regulation of actin filament polymerization  cell-cell contact zone  actin filament bundle assembly  actin crosslink formation  membrane organization  clathrin complex  positive regulation of actin cytoskeleton reorganization  
NDEx NetworkBAIAP2L2
Atlas of Cancer Signalling NetworkBAIAP2L2
Wikipedia pathwaysBAIAP2L2
Orthology - Evolution
OrthoDB80115
GeneTree (enSembl)ENSG00000128298
Phylogenetic Trees/Animal Genes : TreeFamBAIAP2L2
HOVERGENQ6UXY1
HOGENOMQ6UXY1
Homologs : HomoloGeneBAIAP2L2
Homology/Alignments : Family Browser (UCSC)BAIAP2L2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBAIAP2L2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BAIAP2L2
dbVarBAIAP2L2
ClinVarBAIAP2L2
1000_GenomesBAIAP2L2 
Exome Variant ServerBAIAP2L2
ExAC (Exome Aggregation Consortium)BAIAP2L2 (select the gene name)
Genetic variants : HAPMAP80115
Genomic Variants (DGV)BAIAP2L2 [DGVbeta]
DECIPHER (Syndromes)22:38480896-38506676  ENSG00000128298
CONAN: Copy Number AnalysisBAIAP2L2 
Mutations
ICGC Data PortalBAIAP2L2 
TCGA Data PortalBAIAP2L2 
Broad Tumor PortalBAIAP2L2
OASIS PortalBAIAP2L2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBAIAP2L2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBAIAP2L2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BAIAP2L2
DgiDB (Drug Gene Interaction Database)BAIAP2L2
DoCM (Curated mutations)BAIAP2L2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BAIAP2L2 (select a term)
intoGenBAIAP2L2
Cancer3DBAIAP2L2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenBAIAP2L2
Genetic Testing Registry BAIAP2L2
NextProtQ6UXY1 [Medical]
TSGene80115
GENETestsBAIAP2L2
Huge Navigator BAIAP2L2 [HugePedia]
snp3D : Map Gene to Disease80115
BioCentury BCIQBAIAP2L2
ClinGenBAIAP2L2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80115
Chemical/Pharm GKB GenePA142672563
Clinical trialBAIAP2L2
Miscellaneous
canSAR (ICR)BAIAP2L2 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBAIAP2L2
EVEXBAIAP2L2
GoPubMedBAIAP2L2
iHOPBAIAP2L2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:55:39 CET 2017

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