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BAIAP3 (BAI1-associated protein 3)

Identity

Alias_namesBAI1-associated protein 3
Alias_symbol (synonym)BAP3
KIAA0734
Other alias
HGNC (Hugo) BAIAP3
LocusID (NCBI) 8938
Atlas_Id 60702
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 1386198 and ends at 1399442 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BAIAP3   948
Cards
Entrez_Gene (NCBI)BAIAP3  8938  BAI1-associated protein 3
AliasesBAP3
GeneCards (Weizmann)BAIAP3
Ensembl hg19 (Hinxton)ENSG00000007516 [Gene_View]  chr16:1386198-1399442 [Contig_View]  BAIAP3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000007516 [Gene_View]  chr16:1386198-1399442 [Contig_View]  BAIAP3 [Vega]
ICGC DataPortalENSG00000007516
TCGA cBioPortalBAIAP3
AceView (NCBI)BAIAP3
Genatlas (Paris)BAIAP3
WikiGenes8938
SOURCE (Princeton)BAIAP3
Genetics Home Reference (NIH)BAIAP3
Genomic and cartography
GoldenPath hg19 (UCSC)BAIAP3  -     chr16:1386198-1399442 +  16p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BAIAP3  -     16p13.3   [Description]    (hg38-Dec_2013)
EnsemblBAIAP3 - 16p13.3 [CytoView hg19]  BAIAP3 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIBAIAP3 [Mapview hg19]  BAIAP3 [Mapview hg38]
OMIM604009   
Gene and transcription
Genbank (Entrez)AB018277 AF038191 AK294491 AK294576 AK294744
RefSeq transcript (Entrez)NM_001199096 NM_001199097 NM_001199098 NM_001199099 NM_001286464 NM_003933
RefSeq genomic (Entrez)NC_000016 NC_018927 NG_033974 NT_010393 NW_004929400
Consensus coding sequences : CCDS (NCBI)BAIAP3
Cluster EST : UnigeneHs.458427 [ NCBI ]
CGAP (NCI)Hs.458427
Alternative Splicing GalleryENSG00000007516
Gene ExpressionBAIAP3 [ NCBI-GEO ]   BAIAP3 [ EBI - ARRAY_EXPRESS ]   BAIAP3 [ SEEK ]   BAIAP3 [ MEM ]
Gene Expression Viewer (FireBrowse)BAIAP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8938
GTEX Portal (Tissue expression)BAIAP3
Protein : pattern, domain, 3D structure
UniProt/SwissProtO94812   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO94812  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO94812
Splice isoforms : SwissVarO94812
PhosPhoSitePlusO94812
Domaine pattern : Prosite (Expaxy)C2 (PS50004)    MHD1 (PS51258)    MHD2 (PS51259)   
Domains : Interpro (EBI)C2_dom    Munc13_1    Munc13_dom-2    Munc13_subgr_dom-2   
Domain families : Pfam (Sanger)C2 (PF00168)    Membr_traf_MHD (PF10540)   
Domain families : Pfam (NCBI)pfam00168    pfam10540   
Domain families : Smart (EMBL)C2 (SM00239)  
Conserved Domain (NCBI)BAIAP3
DMDM Disease mutations8938
Blocks (Seattle)BAIAP3
SuperfamilyO94812
Human Protein AtlasENSG00000007516
Peptide AtlasO94812
HPRD04925
IPIIPI00181743   IPI00644544   IPI00909532   IPI00910768   IPI00978852   IPI00910379   IPI00975485   IPI01015819   
Protein Interaction databases
DIP (DOE-UCLA)O94812
IntAct (EBI)O94812
FunCoupENSG00000007516
BioGRIDBAIAP3
STRING (EMBL)BAIAP3
ZODIACBAIAP3
Ontologies - Pathways
QuickGOO94812
Ontology : AmiGOcell  G-protein coupled receptor signaling pathway  neurotransmitter secretion  protein C-terminus binding  
Ontology : EGO-EBIcell  G-protein coupled receptor signaling pathway  neurotransmitter secretion  protein C-terminus binding  
Pathways : KEGGTranscriptional misregulation in cancer   
NDEx NetworkBAIAP3
Atlas of Cancer Signalling NetworkBAIAP3
Wikipedia pathwaysBAIAP3
Orthology - Evolution
OrthoDB8938
GeneTree (enSembl)ENSG00000007516
Phylogenetic Trees/Animal Genes : TreeFamBAIAP3
HOVERGENO94812
HOGENOMO94812
Homologs : HomoloGeneBAIAP3
Homology/Alignments : Family Browser (UCSC)BAIAP3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBAIAP3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BAIAP3
dbVarBAIAP3
ClinVarBAIAP3
1000_GenomesBAIAP3 
Exome Variant ServerBAIAP3
ExAC (Exome Aggregation Consortium)BAIAP3 (select the gene name)
Genetic variants : HAPMAP8938
Genomic Variants (DGV)BAIAP3 [DGVbeta]
DECIPHER (Syndromes)16:1386198-1399442  ENSG00000007516
CONAN: Copy Number AnalysisBAIAP3 
Mutations
ICGC Data PortalBAIAP3 
TCGA Data PortalBAIAP3 
Broad Tumor PortalBAIAP3
OASIS PortalBAIAP3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBAIAP3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBAIAP3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BAIAP3
DgiDB (Drug Gene Interaction Database)BAIAP3
DoCM (Curated mutations)BAIAP3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BAIAP3 (select a term)
intoGenBAIAP3
Cancer3DBAIAP3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604009   
Orphanet
MedgenBAIAP3
Genetic Testing Registry BAIAP3
NextProtO94812 [Medical]
TSGene8938
GENETestsBAIAP3
Huge Navigator BAIAP3 [HugePedia]
snp3D : Map Gene to Disease8938
BioCentury BCIQBAIAP3
ClinGenBAIAP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8938
Chemical/Pharm GKB GenePA25252
Clinical trialBAIAP3
Miscellaneous
canSAR (ICR)BAIAP3 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBAIAP3
EVEXBAIAP3
GoPubMedBAIAP3
iHOPBAIAP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:55:39 CET 2017

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