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BANCR (BRAF-activated non-protein coding RNA)

Identity

Alias_symbol (synonym)LINC00586
Other alias
HGNC (Hugo) BANCR
LocusID (NCBI) 100885775
Atlas_Id 55469
Location 9q21.11  [Link to chromosome band 9q21]
Location_base_pair Starts at 69296681 and ends at 69307056 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BANCR   43877
Cards
Entrez_Gene (NCBI)BANCR  100885775  BRAF-activated non-protein coding RNA
AliasesLINC00586
GeneCards (Weizmann)BANCR
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:69296681-69307056 [Contig_View]  BANCR [Vega]
TCGA cBioPortalBANCR
AceView (NCBI)BANCR
Genatlas (Paris)BANCR
WikiGenes100885775
SOURCE (Princeton)BANCR
Genetics Home Reference (NIH)BANCR
Genomic and cartography
GoldenPath hg38 (UCSC)BANCR  -     chr9:69296681-69307056 -  9q21.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BANCR  -     9q21.11   [Description]    (hg19-Feb_2009)
EnsemblBANCR - 9q21.11 [CytoView hg19]  BANCR - 9q21.11 [CytoView hg38]
Mapping of homologs : NCBIBANCR [Mapview hg19]  BANCR [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA442062 AA442164 AA992895 AI394221 AI472919
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BANCR
Cluster EST : UnigeneHs.49768 [ NCBI ]
CGAP (NCI)Hs.49768
Gene ExpressionBANCR [ NCBI-GEO ]   BANCR [ EBI - ARRAY_EXPRESS ]   BANCR [ SEEK ]   BANCR [ MEM ]
Gene Expression Viewer (FireBrowse)BANCR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100885775
GTEX Portal (Tissue expression)BANCR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BANCR
DMDM Disease mutations100885775
Blocks (Seattle)BANCR
Protein Interaction databases
BioGRIDBANCR
STRING (EMBL)BANCR
ZODIACBANCR
Ontologies - Pathways
Huge Navigator BANCR [HugePedia]
snp3D : Map Gene to Disease100885775
BioCentury BCIQBANCR
ClinGenBANCR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100885775
Clinical trialBANCR
Miscellaneous
canSAR (ICR)BANCR (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBANCR
EVEXBANCR
GoPubMedBANCR
iHOPBANCR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 18:58:57 CEST 2017

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