BANP (BTG3 associated nuclear protein)

2009-03-01 Affiliation

Identity

HGNC

BANP

LOCATION

16q24.2

LOCUSID

54971

ALIAS

BEND1,SMAR1,SMARBP1

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 54971
MIM: 611564
HGNC: 13450
Ensembl: ENSG00000172530

Variants:

dbSNP: 54971
ClinVar: 54971
TCGA: ENSG00000172530
COSMIC: BANP

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000172530	ENST00000286122	Q8N9N5
ENSG00000172530	ENST00000355022	Q8N9N5
ENSG00000172530	ENST00000355022	A0A0S2Z5C2
ENSG00000172530	ENST00000393207	Q8N9N5
ENSG00000172530	ENST00000393208	Q8N9N5
ENSG00000172530	ENST00000412691	C9JGM9
ENSG00000172530	ENST00000423252	C9JLT2
ENSG00000172530	ENST00000436274	C9JYB6
ENSG00000172530	ENST00000436970	C9JTM8
ENSG00000172530	ENST00000439677	C9J811
ENSG00000172530	ENST00000454563	C9JLS0
ENSG00000172530	ENST00000456902	C9JF73
ENSG00000172530	ENST00000459966	E9PIP2
ENSG00000172530	ENST00000466197	E9PJI6
ENSG00000172530	ENST00000479780	Q8N9N5
ENSG00000172530	ENST00000485772	E9PIP2
ENSG00000172530	ENST00000538234	Q8N9N5
ENSG00000172530	ENST00000538234	A0A0S2Z5M2
ENSG00000172530	ENST00000626016	Q8N9N5

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Gene Expression	REACTOME	R-HSA-74160
Generic Transcription Pathway	REACTOME	R-HSA-212436
Transcriptional Regulation by TP53	REACTOME	R-HSA-3700989
Regulation of TP53 Activity	REACTOME	R-HSA-5633007
Regulation of TP53 Activity through Association with Co-factors	REACTOME	R-HSA-6804759

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
28103507	2017	Circular BANP, an upregulated circular RNA that modulates cell proliferation in colorectal cancer.	48
16166625	2005	Tumor suppressor SMAR1 mediates cyclin D1 repression by recruitment of the SIN3/histone deacetylase 1 complex.	41
20075864	2010	Coordinated regulation of p53 apoptotic targets BAX and PUMA by SMAR1 through an identical MAR element.	27
22674979	2012	Identification of novel T cell factor 4 (TCF-4) binding sites on the HIV long terminal repeat which associate with TCF-4, β-catenin, and SMAR1 to repress HIV transcription.	27
10950932	2000	SMAR1, a novel, alternatively spliced gene product, binds the Scaffold/Matrix-associated region at the T cell receptor beta locus.	26
17668048	2007	p53 target gene SMAR1 is dysregulated in breast cancer: its role in cancer cell migration and invasion.	24
25086032	2014	Inhibition of epithelial to mesenchymal transition by E-cadherin up-regulation via repression of slug transcription and inhibition of E-cadherin degradation: dual role of scaffold/matrix attachment region-binding protein 1 (SMAR1) in breast cancer cells.	23
26080397	2015	Nuclear matrix-associated protein SMAR1 regulates alternative splicing via HDAC6-mediated deacetylation of Sam68.	17
15623522	2005	Abnormal V(D)J recombination of T cell receptor beta locus in SMAR1 transgenic mice.	16

Citation

Dessen P

BANP (BTG3 associated nuclear protein)

Atlas Genet Cytogenet Oncol Haematol. 2009-03-01

Online version: http://atlasgeneticsoncology.org/gene/50829/banp