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BASP1P1 (brain abundant, membrane attached signal protein 1 pseudogene 1)

Identity

Other alias-
HGNC (Hugo) BASP1P1
LocusID (NCBI) 646201
Atlas_Id 60709
Location 13q12.12  [Link to chromosome band 13q12]
Location_base_pair Starts at 22897030 and ends at 22898181 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BASP1P1   39418
Cards
Entrez_Gene (NCBI)BASP1P1  646201  brain abundant, membrane attached signal protein 1 pseudogene 1
Aliases
GeneCards (Weizmann)BASP1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:22897030-22898181 [Contig_View]  BASP1P1 [Vega]
TCGA cBioPortalBASP1P1
AceView (NCBI)BASP1P1
Genatlas (Paris)BASP1P1
WikiGenes646201
SOURCE (Princeton)BASP1P1
Genetics Home Reference (NIH)BASP1P1
Genomic and cartography
GoldenPath hg38 (UCSC)BASP1P1  -     chr13:22897030-22898181 -  13q12.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BASP1P1  -     13q12.12   [Description]    (hg19-Feb_2009)
EnsemblBASP1P1 - 13q12.12 [CytoView hg19]  BASP1P1 - 13q12.12 [CytoView hg38]
Mapping of homologs : NCBIBASP1P1 [Mapview hg19]  BASP1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI624948
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BASP1P1
Cluster EST : UnigeneHs.729338 [ NCBI ]
CGAP (NCI)Hs.729338
Gene ExpressionBASP1P1 [ NCBI-GEO ]   BASP1P1 [ EBI - ARRAY_EXPRESS ]   BASP1P1 [ SEEK ]   BASP1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)BASP1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646201
GTEX Portal (Tissue expression)BASP1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BASP1P1
DMDM Disease mutations646201
Blocks (Seattle)BASP1P1
Protein Interaction databases
BioGRIDBASP1P1
STRING (EMBL)BASP1P1
ZODIACBASP1P1
Ontologies - Pathways
Huge Navigator BASP1P1 [HugePedia]
snp3D : Map Gene to Disease646201
BioCentury BCIQBASP1P1
ClinGenBASP1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646201
Clinical trialBASP1P1
Miscellaneous
canSAR (ICR)BASP1P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBASP1P1
EVEXBASP1P1
GoPubMedBASP1P1
iHOPBASP1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:19:53 CET 2017

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