Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

BCDIN3D-AS1 (BCDIN3D antisense RNA 1)

Identity

Alias_namesBCDIN3D antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) BCDIN3D-AS1
LocusID (NCBI) 100286844
Atlas_Id 60723
Location 12q13.12  [Link to chromosome band 12q13]
Location_base_pair Starts at 49828543 and ends at 49841154 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BCDIN3D-AS1   44113
Cards
Entrez_Gene (NCBI)BCDIN3D-AS1  100286844  BCDIN3D antisense RNA 1
Aliases
GeneCards (Weizmann)BCDIN3D-AS1
Ensembl hg19 (Hinxton)ENSG00000258057 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258057 [Gene_View]  chr12:49828543-49841154 [Contig_View]  BCDIN3D-AS1 [Vega]
ICGC DataPortalENSG00000258057
TCGA cBioPortalBCDIN3D-AS1
AceView (NCBI)BCDIN3D-AS1
Genatlas (Paris)BCDIN3D-AS1
WikiGenes100286844
SOURCE (Princeton)BCDIN3D-AS1
Genetics Home Reference (NIH)BCDIN3D-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)BCDIN3D-AS1  -     chr12:49828543-49841154 +  12q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BCDIN3D-AS1  -     12q13.12   [Description]    (hg19-Feb_2009)
EnsemblBCDIN3D-AS1 - 12q13.12 [CytoView hg19]  BCDIN3D-AS1 - 12q13.12 [CytoView hg38]
Mapping of homologs : NCBIBCDIN3D-AS1 [Mapview hg19]  BCDIN3D-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI193197 AK055142 BC014925 CB153643 DA122615
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BCDIN3D-AS1
Cluster EST : UnigeneHs.656019 [ NCBI ]
CGAP (NCI)Hs.656019
Alternative Splicing GalleryENSG00000258057
Gene ExpressionBCDIN3D-AS1 [ NCBI-GEO ]   BCDIN3D-AS1 [ EBI - ARRAY_EXPRESS ]   BCDIN3D-AS1 [ SEEK ]   BCDIN3D-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)BCDIN3D-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100286844
GTEX Portal (Tissue expression)BCDIN3D-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BCDIN3D-AS1
DMDM Disease mutations100286844
Blocks (Seattle)BCDIN3D-AS1
Human Protein AtlasENSG00000258057
IPIIPI00744238   
Protein Interaction databases
FunCoupENSG00000258057
BioGRIDBCDIN3D-AS1
STRING (EMBL)BCDIN3D-AS1
ZODIACBCDIN3D-AS1
Ontologies - Pathways
Huge Navigator BCDIN3D-AS1 [HugePedia]
snp3D : Map Gene to Disease100286844
BioCentury BCIQBCDIN3D-AS1
ClinGenBCDIN3D-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100286844
Clinical trialBCDIN3D-AS1
Miscellaneous
canSAR (ICR)BCDIN3D-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBCDIN3D-AS1
EVEXBCDIN3D-AS1
GoPubMedBCDIN3D-AS1
iHOPBCDIN3D-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:02:14 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.