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BCL2L2-PABPN1 (BCL2L2-PABPN1 readthrough)

Identity

Other alias-
HGNC (Hugo) BCL2L2-PABPN1
LocusID (NCBI) 100529063
Atlas_Id 60726
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 23306762 and ends at 23326185 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BCL2L2-PABPN1 (14q11.2) / BCAM (19q13.32)BCL2L2-PABPN1 (14q11.2) / CYP4F8 (19p13.12)BCL2L2-PABPN1 (14q11.2) / MLX (17q21.2)
BCL2L2-PABPN1 (14q11.2) / NASP (1p34.1)BCL2L2-PABPN1 (14q11.2) / NFATC3 (16q22.1)LASP1 (17q12) / BCL2L2-PABPN1 (14q11.2)
RPL3 (22q13.1) / BCL2L2-PABPN1 (14q11.2)TGFBR3 (1p22.1) / BCL2L2-PABPN1 (14q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BCL2L2-PABPN1   42959
Cards
Entrez_Gene (NCBI)BCL2L2-PABPN1  100529063  BCL2L2-PABPN1 readthrough
Aliases
GeneCards (Weizmann)BCL2L2-PABPN1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:23306762-23326185 [Contig_View]  BCL2L2-PABPN1 [Vega]
TCGA cBioPortalBCL2L2-PABPN1
AceView (NCBI)BCL2L2-PABPN1
Genatlas (Paris)BCL2L2-PABPN1
WikiGenes100529063
SOURCE (Princeton)BCL2L2-PABPN1
Genetics Home Reference (NIH)BCL2L2-PABPN1
Genomic and cartography
GoldenPath hg38 (UCSC)BCL2L2-PABPN1  -     chr14:23306762-23326185 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BCL2L2-PABPN1  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblBCL2L2-PABPN1 - 14q11.2 [CytoView hg19]  BCL2L2-PABPN1 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIBCL2L2-PABPN1 [Mapview hg19]  BCL2L2-PABPN1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC011637
RefSeq transcript (Entrez)NM_001199864
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BCL2L2-PABPN1
Cluster EST : UnigeneHs.707712 [ NCBI ]
CGAP (NCI)Hs.707712
Gene ExpressionBCL2L2-PABPN1 [ NCBI-GEO ]   BCL2L2-PABPN1 [ EBI - ARRAY_EXPRESS ]   BCL2L2-PABPN1 [ SEEK ]   BCL2L2-PABPN1 [ MEM ]
Gene Expression Viewer (FireBrowse)BCL2L2-PABPN1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100529063
GTEX Portal (Tissue expression)BCL2L2-PABPN1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BCL2L2-PABPN1
DMDM Disease mutations100529063
Blocks (Seattle)BCL2L2-PABPN1
IPIIPI01025979   IPI00977968   
Protein Interaction databases
BioGRIDBCL2L2-PABPN1
STRING (EMBL)BCL2L2-PABPN1
ZODIACBCL2L2-PABPN1
Ontologies - Pathways
Huge Navigator BCL2L2-PABPN1 [HugePedia]
snp3D : Map Gene to Disease100529063
BioCentury BCIQBCL2L2-PABPN1
ClinGenBCL2L2-PABPN1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100529063
Chemical/Pharm GKB GenePA166049089
Clinical trialBCL2L2-PABPN1
Miscellaneous
canSAR (ICR)BCL2L2-PABPN1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBCL2L2-PABPN1
EVEXBCL2L2-PABPN1
GoPubMedBCL2L2-PABPN1
iHOPBCL2L2-PABPN1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:39:34 CEST 2017

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