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BCL7A (BCL tumor suppressor 7A)

Identity

Alias_namesBCL7
B-cell CLL/lymphoma 7A
Other alias
HGNC (Hugo) BCL7A
LocusID (NCBI) 605
Atlas_Id 778
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 122021886 and ends at 122062044 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BCL7A (12q24.31) / BCL7A (12q24.31)BCL7A (12q24.31) / KCNIP3 (2q11.1)BCL7A (12q24.31) / MYC (8q24.21)
Ig () / BCL7A (12q24.31)MYC (8q24.21) / BCL7A (12q24.31)PGBD2 (1q44) / BCL7A (12q24.31)
S100A6 (1q21.3) / BCL7A (12q24.31)BCL7A 12q24.31 / KCNIP3 2q11.1S100A6 1q21.3 / BCL7A 12q24.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BCL7A   1004
Cards
Entrez_Gene (NCBI)BCL7A  605  BCL tumor suppressor 7A
AliasesBCL7
GeneCards (Weizmann)BCL7A
Ensembl hg19 (Hinxton)ENSG00000110987 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000110987 [Gene_View]  chr12:122021886-122062044 [Contig_View]  BCL7A [Vega]
ICGC DataPortalENSG00000110987
TCGA cBioPortalBCL7A
AceView (NCBI)BCL7A
Genatlas (Paris)BCL7A
WikiGenes605
SOURCE (Princeton)BCL7A
Genetics Home Reference (NIH)BCL7A
Genomic and cartography
GoldenPath hg38 (UCSC)BCL7A  -     chr12:122021886-122062044 +  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BCL7A  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblBCL7A - 12q24.31 [CytoView hg19]  BCL7A - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIBCL7A [Mapview hg19]  BCL7A [Mapview hg38]
OMIM601406   
Gene and transcription
Genbank (Entrez)AK296159 AK316486 BC094723 BC113627 BM801030
RefSeq transcript (Entrez)NM_001024808 NM_020993
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BCL7A
Cluster EST : UnigeneHs.530970 [ NCBI ]
CGAP (NCI)Hs.530970
Alternative Splicing GalleryENSG00000110987
Gene ExpressionBCL7A [ NCBI-GEO ]   BCL7A [ EBI - ARRAY_EXPRESS ]   BCL7A [ SEEK ]   BCL7A [ MEM ]
Gene Expression Viewer (FireBrowse)BCL7A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)605
GTEX Portal (Tissue expression)BCL7A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4VC05   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4VC05  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4VC05
Splice isoforms : SwissVarQ4VC05
PhosPhoSitePlusQ4VC05
Domains : Interpro (EBI)BCL7   
Domain families : Pfam (Sanger)BCL_N (PF04714)   
Domain families : Pfam (NCBI)pfam04714   
Conserved Domain (NCBI)BCL7A
DMDM Disease mutations605
Blocks (Seattle)BCL7A
SuperfamilyQ4VC05
Human Protein AtlasENSG00000110987
Peptide AtlasQ4VC05
HPRD03243
IPIIPI00607700   IPI00025786   
Protein Interaction databases
DIP (DOE-UCLA)Q4VC05
IntAct (EBI)Q4VC05
FunCoupENSG00000110987
BioGRIDBCL7A
STRING (EMBL)BCL7A
ZODIACBCL7A
Ontologies - Pathways
QuickGOQ4VC05
Ontology : AmiGOmolecular_function  protein binding  cellular_component  negative regulation of transcription, DNA-templated  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  negative regulation of transcription, DNA-templated  
NDEx NetworkBCL7A
Atlas of Cancer Signalling NetworkBCL7A
Wikipedia pathwaysBCL7A
Orthology - Evolution
OrthoDB605
GeneTree (enSembl)ENSG00000110987
Phylogenetic Trees/Animal Genes : TreeFamBCL7A
HOVERGENQ4VC05
HOGENOMQ4VC05
Homologs : HomoloGeneBCL7A
Homology/Alignments : Family Browser (UCSC)BCL7A
Gene fusions - Rearrangements
Fusion : MitelmanBCL7A/KCNIP3 [12q24.31/2q11.1]  
Fusion : MitelmanMYC/BCL7A [8q24.21/12q24.31]  [t(8;14;12)(q24;q32;q24)]  
Fusion : MitelmanS100A6/BCL7A [1q21.3/12q24.31]  [t(1;12)(q21;q24)]  
Fusion: TCGABCL7A 12q24.31 KCNIP3 2q11.1 BRCA
Fusion: TCGAS100A6 1q21.3 BCL7A 12q24.31 THCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBCL7A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BCL7A
dbVarBCL7A
ClinVarBCL7A
1000_GenomesBCL7A 
Exome Variant ServerBCL7A
ExAC (Exome Aggregation Consortium)BCL7A (select the gene name)
Genetic variants : HAPMAP605
Genomic Variants (DGV)BCL7A [DGVbeta]
DECIPHERBCL7A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBCL7A 
Mutations
ICGC Data PortalBCL7A 
TCGA Data PortalBCL7A 
Broad Tumor PortalBCL7A
OASIS PortalBCL7A [ Somatic mutations - Copy number]
Cancer Gene: CensusBCL7A 
Somatic Mutations in Cancer : COSMICBCL7A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBCL7A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BCL7A
DgiDB (Drug Gene Interaction Database)BCL7A
DoCM (Curated mutations)BCL7A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BCL7A (select a term)
intoGenBCL7A
Cancer3DBCL7A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601406   
Orphanet
MedgenBCL7A
Genetic Testing Registry BCL7A
NextProtQ4VC05 [Medical]
TSGene605
GENETestsBCL7A
Target ValidationBCL7A
Huge Navigator BCL7A [HugePedia]
snp3D : Map Gene to Disease605
BioCentury BCIQBCL7A
ClinGenBCL7A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD605
Chemical/Pharm GKB GenePA25314
Clinical trialBCL7A
Miscellaneous
canSAR (ICR)BCL7A (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBCL7A
EVEXBCL7A
GoPubMedBCL7A
iHOPBCL7A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 18:59:07 CEST 2017

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