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BEND7 (BEN domain containing 7)

Identity

Alias (NCBI)C10orf30
HGNC (Hugo) BEND7
HGNC Alias symbFLJ40283
HGNC Previous nameC10orf30
HGNC Previous namechromosome 10 open reading frame 30
LocusID (NCBI) 222389
Atlas_Id 60738
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 13438484 and ends at 13502976 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)BEND7   23514
Cards
Entrez_Gene (NCBI)BEND7    BEN domain containing 7
AliasesC10orf30
GeneCards (Weizmann)BEND7
Ensembl hg19 (Hinxton)ENSG00000165626 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165626 [Gene_View]  ENSG00000165626 [Sequence]  chr10:13438484-13502976 [Contig_View]  BEND7 [Vega]
ICGC DataPortalENSG00000165626
TCGA cBioPortalBEND7
AceView (NCBI)BEND7
Genatlas (Paris)BEND7
SOURCE (Princeton)BEND7
Genetics Home Reference (NIH)BEND7
Genomic and cartography
GoldenPath hg38 (UCSC)BEND7  -     chr10:13438484-13502976 -  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BEND7  -     10p13   [Description]    (hg19-Feb_2009)
GoldenPathBEND7 - 10p13 [CytoView hg19]  BEND7 - 10p13 [CytoView hg38]
ImmunoBaseENSG00000165626
Genome Data Viewer NCBIBEND7 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK097602 AL832195 BC029597 BC031618
RefSeq transcript (Entrez)NM_001100912 NM_001369863 NM_001370075 NM_001378149 NM_001378150 NM_001378151 NM_001387359 NM_152751
Consensus coding sequences : CCDS (NCBI)BEND7
Gene ExpressionBEND7 [ NCBI-GEO ]   BEND7 [ EBI - ARRAY_EXPRESS ]   BEND7 [ SEEK ]   BEND7 [ MEM ]
Gene Expression Viewer (FireBrowse)BEND7 [ Firebrowse - Broad ]
GenevisibleExpression of BEND7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222389
GTEX Portal (Tissue expression)BEND7
Human Protein AtlasENSG00000165626-BEND7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7W2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7W2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7W2
PhosPhoSitePlusQ8N7W2
Domaine pattern : Prosite (Expaxy)BEN (PS51457)   
Domains : Interpro (EBI)BEN_domain   
Domain families : Pfam (Sanger)BEN (PF10523)   
Domain families : Pfam (NCBI)pfam10523   
Domain families : Smart (EMBL)BEN (SM01025)  
Conserved Domain (NCBI)BEND7
SuperfamilyQ8N7W2
AlphaFold pdb e-kbQ8N7W2   
Human Protein Atlas [tissue]ENSG00000165626-BEND7 [tissue]
HPRD12570
Protein Interaction databases
DIP (DOE-UCLA)Q8N7W2
IntAct (EBI)Q8N7W2
BioGRIDBEND7
STRING (EMBL)BEND7
ZODIACBEND7
Ontologies - Pathways
QuickGOQ8N7W2
Ontology : AmiGOprotein binding  extracellular exosome  
Ontology : EGO-EBIprotein binding  extracellular exosome  
NDEx NetworkBEND7
Atlas of Cancer Signalling NetworkBEND7
Wikipedia pathwaysBEND7
Orthology - Evolution
OrthoDB222389
GeneTree (enSembl)ENSG00000165626
Phylogenetic Trees/Animal Genes : TreeFamBEND7
Homologs : HomoloGeneBEND7
Homology/Alignments : Family Browser (UCSC)BEND7
Gene fusions - Rearrangements
Fusion : QuiverBEND7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBEND7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BEND7
dbVarBEND7
ClinVarBEND7
MonarchBEND7
1000_GenomesBEND7 
Exome Variant ServerBEND7
GNOMAD BrowserENSG00000165626
Varsome BrowserBEND7
ACMGBEND7 variants
VarityQ8N7W2
Genomic Variants (DGV)BEND7 [DGVbeta]
DECIPHERBEND7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBEND7 
Mutations
ICGC Data PortalBEND7 
TCGA Data PortalBEND7 
Broad Tumor PortalBEND7
OASIS PortalBEND7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBEND7  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DBEND7
Mutations and Diseases : HGMDBEND7
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaBEND7
DgiDB (Drug Gene Interaction Database)BEND7
DoCM (Curated mutations)BEND7
CIViC (Clinical Interpretations of Variants in Cancer)BEND7
Cancer3DBEND7
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETBEND7
MedgenBEND7
Genetic Testing Registry BEND7
NextProtQ8N7W2 [Medical]
GENETestsBEND7
Target ValidationBEND7
Huge Navigator BEND7 [HugePedia]
ClinGenBEND7
Clinical trials, drugs, therapy
MyCancerGenomeBEND7
Protein Interactions : CTDBEND7
Pharm GKB GenePA164716578
PharosQ8N7W2
Clinical trialBEND7
Miscellaneous
canSAR (ICR)BEND7
HarmonizomeBEND7
DataMed IndexBEND7
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXBEND7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:43:17 CEST 2021

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