Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BHLHE40-AS1 (BHLHE40 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) BHLHE40-AS1
LocusID (NCBI) 100507582
Atlas_Id 60753
Location 3p26.1  [Link to chromosome band 3p26]
Location_base_pair Starts at 4896809 and ends at 4979961 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BHLHE40-AS1   44471
Cards
Entrez_Gene (NCBI)BHLHE40-AS1  100507582  BHLHE40 antisense RNA 1
Aliases
GeneCards (Weizmann)BHLHE40-AS1
Ensembl hg19 (Hinxton)ENSG00000235831 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235831 [Gene_View]  chr3:4896809-4979961 [Contig_View]  BHLHE40-AS1 [Vega]
ICGC DataPortalENSG00000235831
TCGA cBioPortalBHLHE40-AS1
AceView (NCBI)BHLHE40-AS1
Genatlas (Paris)BHLHE40-AS1
WikiGenes100507582
SOURCE (Princeton)BHLHE40-AS1
Genetics Home Reference (NIH)BHLHE40-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)BHLHE40-AS1  -     chr3:4896809-4979961 -  3p26.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BHLHE40-AS1  -     3p26.1   [Description]    (hg19-Feb_2009)
EnsemblBHLHE40-AS1 - 3p26.1 [CytoView hg19]  BHLHE40-AS1 - 3p26.1 [CytoView hg38]
Mapping of homologs : NCBIBHLHE40-AS1 [Mapview hg19]  BHLHE40-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056892 AK311159 AK311646 DA948054
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BHLHE40-AS1
Cluster EST : UnigeneHs.434505 [ NCBI ]
CGAP (NCI)Hs.434505
Alternative Splicing GalleryENSG00000235831
Gene ExpressionBHLHE40-AS1 [ NCBI-GEO ]   BHLHE40-AS1 [ EBI - ARRAY_EXPRESS ]   BHLHE40-AS1 [ SEEK ]   BHLHE40-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)BHLHE40-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507582
GTEX Portal (Tissue expression)BHLHE40-AS1
Human Protein AtlasENSG00000235831-BHLHE40-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BHLHE40-AS1
DMDM Disease mutations100507582
Blocks (Seattle)BHLHE40-AS1
Human Protein Atlas [tissue]ENSG00000235831-BHLHE40-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000235831
BioGRIDBHLHE40-AS1
STRING (EMBL)BHLHE40-AS1
ZODIACBHLHE40-AS1
Ontologies - Pathways
Huge Navigator BHLHE40-AS1 [HugePedia]
snp3D : Map Gene to Disease100507582
BioCentury BCIQBHLHE40-AS1
ClinGenBHLHE40-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507582
Clinical trialBHLHE40-AS1
Miscellaneous
canSAR (ICR)BHLHE40-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBHLHE40-AS1
EVEXBHLHE40-AS1
GoPubMedBHLHE40-AS1
iHOPBHLHE40-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:07:03 CET 2017

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