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BICDL2 (BICD family like cargo adaptor 2)

Identity

Alias_namesCCDC64B
coiled-coil domain containing 64B
Other aliasBICDR-2
BICDR2
HGNC (Hugo) BICDL2
LocusID (NCBI) 146439
Atlas_Id 78378
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 3027867 and ends at 3035541 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BICDL2   33584
Cards
Entrez_Gene (NCBI)BICDL2  146439  BICD family like cargo adaptor 2
AliasesBICDR-2; BICDR2; CCDC64B
GeneCards (Weizmann)BICDL2
Ensembl hg19 (Hinxton)ENSG00000162069 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162069 [Gene_View]  chr16:3027867-3035541 [Contig_View]  BICDL2 [Vega]
ICGC DataPortalENSG00000162069
TCGA cBioPortalBICDL2
AceView (NCBI)BICDL2
Genatlas (Paris)BICDL2
WikiGenes146439
SOURCE (Princeton)BICDL2
Genetics Home Reference (NIH)BICDL2
Genomic and cartography
GoldenPath hg38 (UCSC)BICDL2  -     chr16:3027867-3035541 -  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BICDL2  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblBICDL2 - 16p13.3 [CytoView hg19]  BICDL2 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIBICDL2 [Mapview hg19]  BICDL2 [Mapview hg38]
OMIM617003   
Gene and transcription
Genbank (Entrez)AK307181 AL833717 AL833749 BC015446 BC128602
RefSeq transcript (Entrez)NM_001103175
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BICDL2
Cluster EST : UnigeneHs.513285 [ NCBI ]
CGAP (NCI)Hs.513285
Alternative Splicing GalleryENSG00000162069
Gene ExpressionBICDL2 [ NCBI-GEO ]   BICDL2 [ EBI - ARRAY_EXPRESS ]   BICDL2 [ SEEK ]   BICDL2 [ MEM ]
Gene Expression Viewer (FireBrowse)BICDL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)146439
GTEX Portal (Tissue expression)BICDL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1A5D9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA1A5D9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA1A5D9
Splice isoforms : SwissVarA1A5D9
PhosPhoSitePlusA1A5D9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BICDL2
DMDM Disease mutations146439
Blocks (Seattle)BICDL2
SuperfamilyA1A5D9
Human Protein AtlasENSG00000162069
Peptide AtlasA1A5D9
IPIIPI00095032   IPI00783304   
Protein Interaction databases
DIP (DOE-UCLA)A1A5D9
IntAct (EBI)A1A5D9
FunCoupENSG00000162069
BioGRIDBICDL2
STRING (EMBL)BICDL2
ZODIACBICDL2
Ontologies - Pathways
QuickGOA1A5D9
Ontology : AmiGOprotein binding  Rab GTPase binding  
Ontology : EGO-EBIprotein binding  Rab GTPase binding  
NDEx NetworkBICDL2
Atlas of Cancer Signalling NetworkBICDL2
Wikipedia pathwaysBICDL2
Orthology - Evolution
OrthoDB146439
GeneTree (enSembl)ENSG00000162069
Phylogenetic Trees/Animal Genes : TreeFamBICDL2
HOVERGENA1A5D9
HOGENOMA1A5D9
Homologs : HomoloGeneBICDL2
Homology/Alignments : Family Browser (UCSC)BICDL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBICDL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BICDL2
dbVarBICDL2
ClinVarBICDL2
1000_GenomesBICDL2 
Exome Variant ServerBICDL2
ExAC (Exome Aggregation Consortium)BICDL2 (select the gene name)
Genetic variants : HAPMAP146439
Genomic Variants (DGV)BICDL2 [DGVbeta]
DECIPHERBICDL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBICDL2 
Mutations
ICGC Data PortalBICDL2 
TCGA Data PortalBICDL2 
Broad Tumor PortalBICDL2
OASIS PortalBICDL2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDBICDL2
BioMutasearch BICDL2
DgiDB (Drug Gene Interaction Database)BICDL2
DoCM (Curated mutations)BICDL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BICDL2 (select a term)
intoGenBICDL2
Cancer3DBICDL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617003   
Orphanet
MedgenBICDL2
Genetic Testing Registry BICDL2
NextProtA1A5D9 [Medical]
TSGene146439
GENETestsBICDL2
Target ValidationBICDL2
Huge Navigator BICDL2 [HugePedia]
snp3D : Map Gene to Disease146439
BioCentury BCIQBICDL2
ClinGenBICDL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD146439
Chemical/Pharm GKB GenePA162381686
Clinical trialBICDL2
Miscellaneous
canSAR (ICR)BICDL2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBICDL2
EVEXBICDL2
GoPubMedBICDL2
iHOPBICDL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:39:41 CEST 2017

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