Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BIN3-IT1 (BIN3 intronic transcript 1)

Identity

Alias_namesBIN3 intronic transcript 1 (non-protein coding)
Alias_symbol (synonym)FLJ14107
Other alias-
HGNC (Hugo) BIN3-IT1
LocusID (NCBI) 80094
Atlas_Id 60757
Location 8p21.3  [Link to chromosome band 8p21]
Location_base_pair Starts at 22497884 and ends at 22499675 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BIN3-IT1   25868
Cards
Entrez_Gene (NCBI)BIN3-IT1  80094  BIN3 intronic transcript 1
Aliases
GeneCards (Weizmann)BIN3-IT1
Ensembl hg19 (Hinxton) [Gene_View]  chr8:22497884-22499675 [Contig_View]  BIN3-IT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:22497884-22499675 [Contig_View]  BIN3-IT1 [Vega]
TCGA cBioPortalBIN3-IT1
AceView (NCBI)BIN3-IT1
Genatlas (Paris)BIN3-IT1
WikiGenes80094
SOURCE (Princeton)BIN3-IT1
Genetics Home Reference (NIH)BIN3-IT1
Genomic and cartography
GoldenPath hg19 (UCSC)BIN3-IT1  -     chr8:22497884-22499675 -  8p21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BIN3-IT1  -     8p21.3   [Description]    (hg38-Dec_2013)
EnsemblBIN3-IT1 - 8p21.3 [CytoView hg19]  BIN3-IT1 - 8p21.3 [CytoView hg38]
Mapping of homologs : NCBIBIN3-IT1 [Mapview hg19]  BIN3-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024169 BC013100 DN996902
RefSeq transcript (Entrez)NM_025026
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_167187 NW_004929337
Consensus coding sequences : CCDS (NCBI)BIN3-IT1
Cluster EST : UnigeneHs.675917 [ NCBI ]
CGAP (NCI)Hs.675917
Gene ExpressionBIN3-IT1 [ NCBI-GEO ]   BIN3-IT1 [ EBI - ARRAY_EXPRESS ]   BIN3-IT1 [ SEEK ]   BIN3-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)BIN3-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)80094
GTEX Portal (Tissue expression)BIN3-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BIN3-IT1
DMDM Disease mutations80094
Blocks (Seattle)BIN3-IT1
HPRD07850
IPIIPI00017874   
Protein Interaction databases
BioGRIDBIN3-IT1
STRING (EMBL)BIN3-IT1
ZODIACBIN3-IT1
Ontologies - Pathways
Huge Navigator BIN3-IT1 [HugePedia]
snp3D : Map Gene to Disease80094
BioCentury BCIQBIN3-IT1
ClinGenBIN3-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80094
Clinical trialBIN3-IT1
Miscellaneous
canSAR (ICR)BIN3-IT1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBIN3-IT1
EVEXBIN3-IT1
GoPubMedBIN3-IT1
iHOPBIN3-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:55:51 CET 2017

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