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BIVM-ERCC5 (BIVM-ERCC5 readthrough)

Identity

Other aliasERCC5-202
HGNC (Hugo) BIVM-ERCC5
LocusID (NCBI) 100533467
Atlas_Id 60760
Location 13q33.1  [Link to chromosome band 13q33]
Location_base_pair Starts at 102807146 and ends at 102876001 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BIVM-ERCC5 (13q33.1) / RBM26 (13q31.1)NOLC1 (10q24.32) / BIVM-ERCC5 (13q33.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BIVM-ERCC5   43690
Cards
Entrez_Gene (NCBI)BIVM-ERCC5  100533467  BIVM-ERCC5 readthrough
AliasesERCC5-202
GeneCards (Weizmann)BIVM-ERCC5
Ensembl hg19 (Hinxton)ENSG00000270181 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000270181 [Gene_View]  chr13:102807146-102876001 [Contig_View]  BIVM-ERCC5 [Vega]
ICGC DataPortalENSG00000270181
TCGA cBioPortalBIVM-ERCC5
AceView (NCBI)BIVM-ERCC5
Genatlas (Paris)BIVM-ERCC5
WikiGenes100533467
SOURCE (Princeton)BIVM-ERCC5
Genetics Home Reference (NIH)BIVM-ERCC5
Genomic and cartography
GoldenPath hg38 (UCSC)BIVM-ERCC5  -     chr13:102807146-102876001 +  13q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BIVM-ERCC5  -     13q33.1   [Description]    (hg19-Feb_2009)
EnsemblBIVM-ERCC5 - 13q33.1 [CytoView hg19]  BIVM-ERCC5 - 13q33.1 [CytoView hg38]
Mapping of homologs : NCBIBIVM-ERCC5 [Mapview hg19]  BIVM-ERCC5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB209312 LM994822
RefSeq transcript (Entrez)NM_001204425
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BIVM-ERCC5
Cluster EST : UnigeneHs.258429 [ NCBI ]
CGAP (NCI)Hs.258429
Alternative Splicing GalleryENSG00000270181
Gene ExpressionBIVM-ERCC5 [ NCBI-GEO ]   BIVM-ERCC5 [ EBI - ARRAY_EXPRESS ]   BIVM-ERCC5 [ SEEK ]   BIVM-ERCC5 [ MEM ]
Gene Expression Viewer (FireBrowse)BIVM-ERCC5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100533467
GTEX Portal (Tissue expression)BIVM-ERCC5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BIVM-ERCC5
DMDM Disease mutations100533467
Blocks (Seattle)BIVM-ERCC5
Human Protein AtlasENSG00000270181
IPIIPI00477535   IPI00848102   IPI00552845   IPI01010865   IPI00005267   IPI00978010   IPI00981296   
Protein Interaction databases
FunCoupENSG00000270181
BioGRIDBIVM-ERCC5
STRING (EMBL)BIVM-ERCC5
ZODIACBIVM-ERCC5
Ontologies - Pathways
Huge Navigator BIVM-ERCC5 [HugePedia]
snp3D : Map Gene to Disease100533467
BioCentury BCIQBIVM-ERCC5
ClinGenBIVM-ERCC5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533467
Clinical trialBIVM-ERCC5
Miscellaneous
canSAR (ICR)BIVM-ERCC5 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBIVM-ERCC5
EVEXBIVM-ERCC5
GoPubMedBIVM-ERCC5
iHOPBIVM-ERCC5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:02:20 CEST 2017

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