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BLACE (B cell acute lymphoblastic leukemia expressed)

Identity

Other alias-
HGNC (Hugo) BLACE
LocusID (NCBI) 338436
Atlas_Id 800
Location 7q36.3  [Link to chromosome band 7q36]
Location_base_pair Starts at 155356988 and ends at 155367933 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BLACE   20484
Cards
Entrez_Gene (NCBI)BLACE  338436  B cell acute lymphoblastic leukemia expressed
Aliases
GeneCards (Weizmann)BLACE
Ensembl hg19 (Hinxton)ENSG00000204960 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204960 [Gene_View]  chr7:155356988-155367933 [Contig_View]  BLACE [Vega]
ICGC DataPortalENSG00000204960
TCGA cBioPortalBLACE
AceView (NCBI)BLACE
Genatlas (Paris)BLACE
WikiGenes338436
SOURCE (Princeton)BLACE
Genetics Home Reference (NIH)BLACE
Genomic and cartography
GoldenPath hg38 (UCSC)BLACE  -     chr7:155356988-155367933 -  7q36.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BLACE  -     7q36.3   [Description]    (hg19-Feb_2009)
EnsemblBLACE - 7q36.3 [CytoView hg19]  BLACE - 7q36.3 [CytoView hg38]
Mapping of homologs : NCBIBLACE [Mapview hg19]  BLACE [Mapview hg38]
OMIM608450   
Gene and transcription
Genbank (Entrez)AY166699
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BLACE
Cluster EST : UnigeneHs.521326 [ NCBI ]
CGAP (NCI)Hs.521326
Alternative Splicing GalleryENSG00000204960
Gene ExpressionBLACE [ NCBI-GEO ]   BLACE [ EBI - ARRAY_EXPRESS ]   BLACE [ SEEK ]   BLACE [ MEM ]
Gene Expression Viewer (FireBrowse)BLACE [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338436
GTEX Portal (Tissue expression)BLACE
Human Protein AtlasENSG00000204960-BLACE [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA4D250   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA4D250  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA4D250
Splice isoforms : SwissVarA4D250
PhosPhoSitePlusA4D250
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BLACE
DMDM Disease mutations338436
Blocks (Seattle)BLACE
SuperfamilyA4D250
Human Protein Atlas [tissue]ENSG00000204960-BLACE [tissue]
Peptide AtlasA4D250
IPIIPI01022128   IPI00844205   
Protein Interaction databases
DIP (DOE-UCLA)A4D250
IntAct (EBI)A4D250
FunCoupENSG00000204960
BioGRIDBLACE
STRING (EMBL)BLACE
ZODIACBLACE
Ontologies - Pathways
QuickGOA4D250
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkBLACE
Atlas of Cancer Signalling NetworkBLACE
Wikipedia pathwaysBLACE
Orthology - Evolution
OrthoDB338436
GeneTree (enSembl)ENSG00000204960
Phylogenetic Trees/Animal Genes : TreeFamBLACE
HOVERGENA4D250
HOGENOMA4D250
Homologs : HomoloGeneBLACE
Homology/Alignments : Family Browser (UCSC)BLACE
Gene fusions - Rearrangements
Fusion : QuiverBLACE
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBLACE [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BLACE
dbVarBLACE
ClinVarBLACE
1000_GenomesBLACE 
Exome Variant ServerBLACE
ExAC (Exome Aggregation Consortium)ENSG00000204960
GNOMAD BrowserENSG00000204960
Genetic variants : HAPMAP338436
Genomic Variants (DGV)BLACE [DGVbeta]
DECIPHERBLACE [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBLACE 
Mutations
ICGC Data PortalBLACE 
TCGA Data PortalBLACE 
Broad Tumor PortalBLACE
OASIS PortalBLACE [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDBLACE
BioMutasearch BLACE
DgiDB (Drug Gene Interaction Database)BLACE
DoCM (Curated mutations)BLACE (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BLACE (select a term)
intoGenBLACE
Cancer3DBLACE(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608450   
Orphanet
DisGeNETBLACE
MedgenBLACE
Genetic Testing Registry BLACE
NextProtA4D250 [Medical]
TSGene338436
GENETestsBLACE
Target ValidationBLACE
Huge Navigator BLACE [HugePedia]
snp3D : Map Gene to Disease338436
BioCentury BCIQBLACE
ClinGenBLACE
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338436
Chemical/Pharm GKB GenePA134883316
Clinical trialBLACE
Miscellaneous
canSAR (ICR)BLACE (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBLACE
EVEXBLACE
GoPubMedBLACE
iHOPBLACE
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 28 13:03:09 CET 2018

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