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BMF (Bcl2 modifying factor)

Identity

Alias_symbol (synonym)FLJ00065
Other alias-
HGNC (Hugo) BMF
LocusID (NCBI) 90427
Atlas_Id 242
Location 15q15.1  [Link to chromosome band 15q15]
Location_base_pair Starts at 40087891 and ends at 40108874 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BMF   24132
Cards
Entrez_Gene (NCBI)BMF  90427  Bcl2 modifying factor
Aliases
GeneCards (Weizmann)BMF
Ensembl hg19 (Hinxton)ENSG00000104081 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104081 [Gene_View]  chr15:40087891-40108874 [Contig_View]  BMF [Vega]
ICGC DataPortalENSG00000104081
TCGA cBioPortalBMF
AceView (NCBI)BMF
Genatlas (Paris)BMF
WikiGenes90427
SOURCE (Princeton)BMF
Genetics Home Reference (NIH)BMF
Genomic and cartography
GoldenPath hg38 (UCSC)BMF  -     chr15:40087891-40108874 -  15q15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BMF  -     15q15.1   [Description]    (hg19-Feb_2009)
EnsemblBMF - 15q15.1 [CytoView hg19]  BMF - 15q15.1 [CytoView hg38]
Mapping of homologs : NCBIBMF [Mapview hg19]  BMF [Mapview hg38]
OMIM606266   
Gene and transcription
Genbank (Entrez)AI281003 AK024472 AY029254 AY222040 AY222041
RefSeq transcript (Entrez)NM_001003940 NM_001003942 NM_001003943 NM_033503
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BMF
Cluster EST : UnigeneHs.591104 [ NCBI ]
CGAP (NCI)Hs.591104
Alternative Splicing GalleryENSG00000104081
Gene ExpressionBMF [ NCBI-GEO ]   BMF [ EBI - ARRAY_EXPRESS ]   BMF [ SEEK ]   BMF [ MEM ]
Gene Expression Viewer (FireBrowse)BMF [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90427
GTEX Portal (Tissue expression)BMF
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LC9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LC9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LC9
Splice isoforms : SwissVarQ96LC9
PhosPhoSitePlusQ96LC9
Domains : Interpro (EBI)BMF   
Domain families : Pfam (Sanger)BMF (PF15185)   
Domain families : Pfam (NCBI)pfam15185   
Conserved Domain (NCBI)BMF
DMDM Disease mutations90427
Blocks (Seattle)BMF
SuperfamilyQ96LC9
Human Protein AtlasENSG00000104081
Peptide AtlasQ96LC9
HPRD05881
IPIIPI00477176   IPI00385531   IPI00385530   
Protein Interaction databases
DIP (DOE-UCLA)Q96LC9
IntAct (EBI)Q96LC9
FunCoupENSG00000104081
BioGRIDBMF
STRING (EMBL)BMF
ZODIACBMF
Ontologies - Pathways
QuickGOQ96LC9
Ontology : AmiGOacrosomal vesicle  protein insertion into mitochondrial membrane involved in apoptotic signaling pathway  protein binding  mitochondrial outer membrane  cytosol  plasma membrane  negative regulation of autophagy  myosin complex  positive regulation of protein homooligomerization  cellular response to UV  positive regulation of apoptotic process  anoikis  positive regulation of release of cytochrome c from mitochondria  positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway  positive regulation of intrinsic apoptotic signaling pathway  
Ontology : EGO-EBIacrosomal vesicle  protein insertion into mitochondrial membrane involved in apoptotic signaling pathway  protein binding  mitochondrial outer membrane  cytosol  plasma membrane  negative regulation of autophagy  myosin complex  positive regulation of protein homooligomerization  cellular response to UV  positive regulation of apoptotic process  anoikis  positive regulation of release of cytochrome c from mitochondria  positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway  positive regulation of intrinsic apoptotic signaling pathway  
Pathways : KEGGMicroRNAs in cancer   
NDEx NetworkBMF
Atlas of Cancer Signalling NetworkBMF
Wikipedia pathwaysBMF
Orthology - Evolution
OrthoDB90427
GeneTree (enSembl)ENSG00000104081
Phylogenetic Trees/Animal Genes : TreeFamBMF
HOVERGENQ96LC9
HOGENOMQ96LC9
Homologs : HomoloGeneBMF
Homology/Alignments : Family Browser (UCSC)BMF
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBMF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BMF
dbVarBMF
ClinVarBMF
1000_GenomesBMF 
Exome Variant ServerBMF
ExAC (Exome Aggregation Consortium)BMF (select the gene name)
Genetic variants : HAPMAP90427
Genomic Variants (DGV)BMF [DGVbeta]
DECIPHERBMF [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBMF 
Mutations
ICGC Data PortalBMF 
TCGA Data PortalBMF 
Broad Tumor PortalBMF
OASIS PortalBMF [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBMF  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBMF
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BMF
DgiDB (Drug Gene Interaction Database)BMF
DoCM (Curated mutations)BMF (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BMF (select a term)
intoGenBMF
Cancer3DBMF(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606266   
Orphanet
MedgenBMF
Genetic Testing Registry BMF
NextProtQ96LC9 [Medical]
TSGene90427
GENETestsBMF
Target ValidationBMF
Huge Navigator BMF [HugePedia]
snp3D : Map Gene to Disease90427
BioCentury BCIQBMF
ClinGenBMF
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90427
Chemical/Pharm GKB GenePA134893658
Clinical trialBMF
Miscellaneous
canSAR (ICR)BMF (select the gene name)
Probes
Litterature
PubMed39 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBMF
EVEXBMF
GoPubMedBMF
iHOPBMF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:25:36 CEST 2017

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