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BMS1P1 (BMS1, ribosome biogenesis factor pseudogene 1)

Identity

Alias_namesBMS1LP1
BMS1P5
BMS1LP5
BMS1L pseudogene 1
BMS1 pseudogene 1
BMS1, ribosome biogenesis factor pseudogene 5
BMS1L pseudogene 5
BMS1 pseudogene 5
Other alias
HGNC (Hugo) BMS1P1
LocusID (NCBI) 399761
Atlas_Id 79378
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 46786874 and ends at 46809627 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)BMS1P1   23649
Cards
Entrez_Gene (NCBI)BMS1P1  399761  BMS1, ribosome biogenesis factor pseudogene 1
AliasesBMS1LP1; BMS1LP5; BMS1P5
GeneCards (Weizmann)BMS1P1
Ensembl hg19 (Hinxton)ENSG00000204177 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204177 [Gene_View]  chr10:46786874-46809627 [Contig_View]  BMS1P1 [Vega]
ICGC DataPortalENSG00000204177
TCGA cBioPortalBMS1P1
AceView (NCBI)BMS1P1
Genatlas (Paris)BMS1P1
WikiGenes399761
SOURCE (Princeton)BMS1P1
Genetics Home Reference (NIH)BMS1P1
Genomic and cartography
GoldenPath hg38 (UCSC)BMS1P1  -     chr10:46786874-46809627 +  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BMS1P1  -     10q11.22   [Description]    (hg19-Feb_2009)
EnsemblBMS1P1 - 10q11.22 [CytoView hg19]  BMS1P1 - 10q11.22 [CytoView hg38]
Mapping of homologs : NCBIBMS1P1 [Mapview hg19]  BMS1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK307333 AL832069 BC017177 BC024278 BC065722
RefSeq transcript (Entrez)NM_001040053
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BMS1P1
Cluster EST : UnigeneHs.743373 [ NCBI ]
CGAP (NCI)Hs.743373
Alternative Splicing GalleryENSG00000204177
Gene ExpressionBMS1P1 [ NCBI-GEO ]   BMS1P1 [ EBI - ARRAY_EXPRESS ]   BMS1P1 [ SEEK ]   BMS1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)BMS1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399761
GTEX Portal (Tissue expression)BMS1P1
Human Protein AtlasENSG00000204177-BMS1P1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BMS1P1
DMDM Disease mutations399761
Blocks (Seattle)BMS1P1
Human Protein Atlas [tissue]ENSG00000204177-BMS1P1 [tissue]
Protein Interaction databases
FunCoupENSG00000204177
BioGRIDBMS1P1
STRING (EMBL)BMS1P1
ZODIACBMS1P1
Ontologies - Pathways
Huge Navigator BMS1P1 [HugePedia]
snp3D : Map Gene to Disease399761
BioCentury BCIQBMS1P1
ClinGenBMS1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399761
Clinical trialBMS1P1
Miscellaneous
canSAR (ICR)BMS1P1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBMS1P1
EVEXBMS1P1
GoPubMedBMS1P1
iHOPBMS1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:21:12 CET 2017

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