BNC2 (basonuclin 2)

2009-11-01  

Identity

HGNC
LOCATION
9p22.3
LOCUSID
ALIAS
BSN2,LUTO
FUSION GENES

Other Information

Locus ID:

NCBI: 54796
MIM: 608669
HGNC: 30988
Ensembl: ENSG00000173068

Variants:

dbSNP: 54796
ClinVar: 54796
TCGA: ENSG00000173068
COSMIC: BNC2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000173068ENST00000380666A0A1B0GX98
ENSG00000173068ENST00000380667B1APH0
ENSG00000173068ENST00000380672Q6ZN30
ENSG00000173068ENST00000411752H0Y4J1
ENSG00000173068ENST00000418777H0Y6W5
ENSG00000173068ENST00000468187S4R3K9
ENSG00000173068ENST00000471301S4R3X5
ENSG00000173068ENST00000484726Q6ZN30
ENSG00000173068ENST00000486514S4R3R8
ENSG00000173068ENST00000545497F5H586
ENSG00000173068ENST00000603313S4R351
ENSG00000173068ENST00000603713Q06HB9
ENSG00000173068ENST00000613349Q06HC7
ENSG00000173068ENST00000617779Q06HC7

Expression (GTEx)

0
5
10
15
20
25
30
35
40

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
208526322010A genome-wide association study identifies susceptibility loci for ovarian cancer at 2q31 and 8q24.172
208526322010A genome-wide association study identifies susceptibility loci for ovarian cancer at 2q31 and 8q24.172
205856272010Web-based, participant-driven studies yield novel genetic associations for common traits.155
185198262008Molecular genetics of successful smoking cessation: convergent genome-wide association study results.130
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.85
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
198756142010A genome-wide association study identifies a novel major locus for glycemic control in type 1 diabetes, as measured by both A1C and glucose.47
262119712015A Functional SNP in BNC2 Is Associated with Adolescent Idiopathic Scoliosis.33
230529462013Comprehensive candidate gene study highlights UGT1A and BNC2 as new genes determining continuous skin color variation in Europeans.23
257058492015A Genome-Wide Association Study Identifies the Skin Color Genes IRF4, MC1R, ASIP, and BNC2 Influencing Facial Pigmented Spots.23

Citation

Dessen P

BNC2 (basonuclin 2)

Atlas Genet Cytogenet Oncol Haematol. 2009-11-01

Online version: http://atlasgeneticsoncology.org/gene/51224/bnc2