Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

BOD1L2 (biorientation of chromosomes in cell division 1 like 2)

Identity

Alias_namesFAM44C
BOD1P
family with sequence similarity 44, member C
biorientation of chromosomes in cell division 1 pseudogene
Alias_symbol (synonym)MGC33608
Other alias
HGNC (Hugo) BOD1L2
LocusID (NCBI) 284257
Atlas_Id 60781
Location 18q21.31  [Link to chromosome band 18q21]
Location_base_pair Starts at 57147062 and ends at 57150408 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BOD1L2   28505
Cards
Entrez_Gene (NCBI)BOD1L2  284257  biorientation of chromosomes in cell division 1 like 2
AliasesBOD1P; FAM44C
GeneCards (Weizmann)BOD1L2
Ensembl hg19 (Hinxton)ENSG00000228075 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228075 [Gene_View]  chr18:57147062-57150408 [Contig_View]  BOD1L2 [Vega]
ICGC DataPortalENSG00000228075
TCGA cBioPortalBOD1L2
AceView (NCBI)BOD1L2
Genatlas (Paris)BOD1L2
WikiGenes284257
SOURCE (Princeton)BOD1L2
Genetics Home Reference (NIH)BOD1L2
Genomic and cartography
GoldenPath hg38 (UCSC)BOD1L2  -     chr18:57147062-57150408 +  18q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BOD1L2  -     18q21.31   [Description]    (hg19-Feb_2009)
EnsemblBOD1L2 - 18q21.31 [CytoView hg19]  BOD1L2 - 18q21.31 [CytoView hg38]
Mapping of homologs : NCBIBOD1L2 [Mapview hg19]  BOD1L2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127964 AK301799 BC021740 BC035018
RefSeq transcript (Entrez)NM_001257964
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BOD1L2
Cluster EST : UnigeneHs.127882 [ NCBI ]
CGAP (NCI)Hs.127882
Alternative Splicing GalleryENSG00000228075
Gene ExpressionBOD1L2 [ NCBI-GEO ]   BOD1L2 [ EBI - ARRAY_EXPRESS ]   BOD1L2 [ SEEK ]   BOD1L2 [ MEM ]
Gene Expression Viewer (FireBrowse)BOD1L2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284257
GTEX Portal (Tissue expression)BOD1L2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IYS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IYS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IYS8
Splice isoforms : SwissVarQ8IYS8
PhosPhoSitePlusQ8IYS8
Domains : Interpro (EBI)Bod1-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BOD1L2
DMDM Disease mutations284257
Blocks (Seattle)BOD1L2
SuperfamilyQ8IYS8
Human Protein AtlasENSG00000228075
Peptide AtlasQ8IYS8
IPIIPI00654693   
Protein Interaction databases
DIP (DOE-UCLA)Q8IYS8
IntAct (EBI)Q8IYS8
FunCoupENSG00000228075
BioGRIDBOD1L2
STRING (EMBL)BOD1L2
ZODIACBOD1L2
Ontologies - Pathways
QuickGOQ8IYS8
Ontology : AmiGOcondensed chromosome kinetochore  cytoplasm  microtubule organizing center  cell cycle  cell division  
Ontology : EGO-EBIcondensed chromosome kinetochore  cytoplasm  microtubule organizing center  cell cycle  cell division  
NDEx NetworkBOD1L2
Atlas of Cancer Signalling NetworkBOD1L2
Wikipedia pathwaysBOD1L2
Orthology - Evolution
OrthoDB284257
GeneTree (enSembl)ENSG00000228075
Phylogenetic Trees/Animal Genes : TreeFamBOD1L2
HOVERGENQ8IYS8
HOGENOMQ8IYS8
Homologs : HomoloGeneBOD1L2
Homology/Alignments : Family Browser (UCSC)BOD1L2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBOD1L2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BOD1L2
dbVarBOD1L2
ClinVarBOD1L2
1000_GenomesBOD1L2 
Exome Variant ServerBOD1L2
ExAC (Exome Aggregation Consortium)BOD1L2 (select the gene name)
Genetic variants : HAPMAP284257
Genomic Variants (DGV)BOD1L2 [DGVbeta]
DECIPHERBOD1L2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBOD1L2 
Mutations
ICGC Data PortalBOD1L2 
TCGA Data PortalBOD1L2 
Broad Tumor PortalBOD1L2
OASIS PortalBOD1L2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBOD1L2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBOD1L2
BioMutasearch BOD1L2
DgiDB (Drug Gene Interaction Database)BOD1L2
DoCM (Curated mutations)BOD1L2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BOD1L2 (select a term)
intoGenBOD1L2
Cancer3DBOD1L2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenBOD1L2
Genetic Testing Registry BOD1L2
NextProtQ8IYS8 [Medical]
TSGene284257
GENETestsBOD1L2
Target ValidationBOD1L2
Huge Navigator BOD1L2 [HugePedia]
snp3D : Map Gene to Disease284257
BioCentury BCIQBOD1L2
ClinGenBOD1L2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284257
Chemical/Pharm GKB GenePA134949651
Clinical trialBOD1L2
Miscellaneous
canSAR (ICR)BOD1L2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBOD1L2
EVEXBOD1L2
GoPubMedBOD1L2
iHOPBOD1L2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:39:47 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.