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BOLA1 (bolA family member 1)

Identity

Alias_namesbolA-like 1 (E. coli)
bolA homolog 1 (E. coli)
Alias_symbol (synonym)CGI-143
Other alias
HGNC (Hugo) BOLA1
LocusID (NCBI) 51027
Atlas_Id 56426
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 149899582 and ends at 149900795 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RPRD2 (1q21.3) / BOLA1 (1q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BOLA1   24263
Cards
Entrez_Gene (NCBI)BOLA1  51027  bolA family member 1
AliasesCGI-143
GeneCards (Weizmann)BOLA1
Ensembl hg19 (Hinxton)ENSG00000178096 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178096 [Gene_View]  chr1:149899582-149900795 [Contig_View]  BOLA1 [Vega]
ICGC DataPortalENSG00000178096
TCGA cBioPortalBOLA1
AceView (NCBI)BOLA1
Genatlas (Paris)BOLA1
WikiGenes51027
SOURCE (Princeton)BOLA1
Genetics Home Reference (NIH)BOLA1
Genomic and cartography
GoldenPath hg38 (UCSC)BOLA1  -     chr1:149899582-149900795 +  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BOLA1  -     1q21.2   [Description]    (hg19-Feb_2009)
EnsemblBOLA1 - 1q21.2 [CytoView hg19]  BOLA1 - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBIBOLA1 [Mapview hg19]  BOLA1 [Mapview hg38]
OMIM613181   
Gene and transcription
Genbank (Entrez)AF151901 AK313014 BC002771 BC063405 BF970430
RefSeq transcript (Entrez)NM_001321025 NM_001321026 NM_016074
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BOLA1
Cluster EST : UnigeneHs.13880 [ NCBI ]
CGAP (NCI)Hs.13880
Alternative Splicing GalleryENSG00000178096
Gene ExpressionBOLA1 [ NCBI-GEO ]   BOLA1 [ EBI - ARRAY_EXPRESS ]   BOLA1 [ SEEK ]   BOLA1 [ MEM ]
Gene Expression Viewer (FireBrowse)BOLA1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51027
GTEX Portal (Tissue expression)BOLA1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y3E2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y3E2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y3E2
Splice isoforms : SwissVarQ9Y3E2
PhosPhoSitePlusQ9Y3E2
Domains : Interpro (EBI)BolA   
Domain families : Pfam (Sanger)BolA (PF01722)   
Domain families : Pfam (NCBI)pfam01722   
Conserved Domain (NCBI)BOLA1
DMDM Disease mutations51027
Blocks (Seattle)BOLA1
PDB (SRS)5LCI   
PDB (PDBSum)5LCI   
PDB (IMB)5LCI   
PDB (RSDB)5LCI   
Structural Biology KnowledgeBase5LCI   
SCOP (Structural Classification of Proteins)5LCI   
CATH (Classification of proteins structures)5LCI   
SuperfamilyQ9Y3E2
Human Protein AtlasENSG00000178096
Peptide AtlasQ9Y3E2
HPRD13036
IPIIPI00032900   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y3E2
IntAct (EBI)Q9Y3E2
FunCoupENSG00000178096
BioGRIDBOLA1
STRING (EMBL)BOLA1
ZODIACBOLA1
Ontologies - Pathways
QuickGOQ9Y3E2
Ontology : AmiGOprotein binding  mitochondrion  
Ontology : EGO-EBIprotein binding  mitochondrion  
NDEx NetworkBOLA1
Atlas of Cancer Signalling NetworkBOLA1
Wikipedia pathwaysBOLA1
Orthology - Evolution
OrthoDB51027
GeneTree (enSembl)ENSG00000178096
Phylogenetic Trees/Animal Genes : TreeFamBOLA1
HOVERGENQ9Y3E2
HOGENOMQ9Y3E2
Homologs : HomoloGeneBOLA1
Homology/Alignments : Family Browser (UCSC)BOLA1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBOLA1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BOLA1
dbVarBOLA1
ClinVarBOLA1
1000_GenomesBOLA1 
Exome Variant ServerBOLA1
ExAC (Exome Aggregation Consortium)BOLA1 (select the gene name)
Genetic variants : HAPMAP51027
Genomic Variants (DGV)BOLA1 [DGVbeta]
DECIPHERBOLA1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBOLA1 
Mutations
ICGC Data PortalBOLA1 
TCGA Data PortalBOLA1 
Broad Tumor PortalBOLA1
OASIS PortalBOLA1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBOLA1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBOLA1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch BOLA1
DgiDB (Drug Gene Interaction Database)BOLA1
DoCM (Curated mutations)BOLA1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BOLA1 (select a term)
intoGenBOLA1
Cancer3DBOLA1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613181   
Orphanet
MedgenBOLA1
Genetic Testing Registry BOLA1
NextProtQ9Y3E2 [Medical]
TSGene51027
GENETestsBOLA1
Huge Navigator BOLA1 [HugePedia]
snp3D : Map Gene to Disease51027
BioCentury BCIQBOLA1
ClinGenBOLA1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51027
Chemical/Pharm GKB GenePA142672552
Clinical trialBOLA1
Miscellaneous
canSAR (ICR)BOLA1 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBOLA1
EVEXBOLA1
GoPubMedBOLA1
iHOPBOLA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:07:56 CEST 2017

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