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BOLA2-SMG1P6 (BOLA2-SMG1P6 readthrough)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 107282092
Atlas_Id 78253
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 29442905 and ends at 29454964 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)BOLA2-SMG1P6  107282092  BOLA2-SMG1P6 readthrough
Aliases
GeneCards (Weizmann)BOLA2-SMG1P6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:29442905-29454964 [Contig_View]  BOLA2-SMG1P6 [Vega]
TCGA cBioPortalBOLA2-SMG1P6
AceView (NCBI)BOLA2-SMG1P6
Genatlas (Paris)BOLA2-SMG1P6
WikiGenes107282092
SOURCE (Princeton)BOLA2-SMG1P6
Genetics Home Reference (NIH)BOLA2-SMG1P6
Genomic and cartography
GoldenPath hg38 (UCSC)BOLA2-SMG1P6  -     chr16:29442905-29454964 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BOLA2-SMG1P6  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblBOLA2-SMG1P6 - 16p11.2 [CytoView hg19]  BOLA2-SMG1P6 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIBOLA2-SMG1P6 [Mapview hg19]  BOLA2-SMG1P6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF271775 AK027255 AK097877 AK295153 BC062756
RefSeq transcript (Entrez)NM_001320622 NM_001320623 NM_001320624 NM_001320625 NM_001320627 NM_001320628
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BOLA2-SMG1P6
Cluster EST : UnigeneHs.745100 [ NCBI ]
CGAP (NCI)Hs.745100
Gene ExpressionBOLA2-SMG1P6 [ NCBI-GEO ]   BOLA2-SMG1P6 [ EBI - ARRAY_EXPRESS ]   BOLA2-SMG1P6 [ SEEK ]   BOLA2-SMG1P6 [ MEM ]
Gene Expression Viewer (FireBrowse)BOLA2-SMG1P6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107282092
GTEX Portal (Tissue expression)BOLA2-SMG1P6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BOLA2-SMG1P6
DMDM Disease mutations107282092
Blocks (Seattle)BOLA2-SMG1P6
Protein Interaction databases
BioGRIDBOLA2-SMG1P6
STRING (EMBL)BOLA2-SMG1P6
ZODIACBOLA2-SMG1P6
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease107282092
BioCentury BCIQBOLA2-SMG1P6
ClinGenBOLA2-SMG1P6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107282092
Clinical trialBOLA2-SMG1P6
Miscellaneous
canSAR (ICR)BOLA2-SMG1P6 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBOLA2-SMG1P6
EVEXBOLA2-SMG1P6
GoPubMedBOLA2-SMG1P6
iHOPBOLA2-SMG1P6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:39:11 CET 2017

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