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BOLA2 (bolA family member 2)

Identity

Alias_namesbolA-like 2 (E. coli)
bolA homolog 2 (E. coli)
Alias_symbol (synonym)My016
BOLA2A
Other aliasBOLA2B
HGNC (Hugo) BOLA2
LocusID (NCBI) 552900
Atlas_Id 60784
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 29453588 and ends at 29454964 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ACBD3 (1q42.12) / BOLA2 (16p11.2)ADIPOR2 (12p13.33) / BOLA2 (16p11.2)BOLA2 (16p11.2) / ACTA1 (1q42.13)
BOLA2 (16p11.2) / ACTN4 (19q13.2)BOLA2 (16p11.2) / AP1B1 (22q12.2)BOLA2 (16p11.2) / BOLA2 (16p11.2)
BOLA2 (16p11.2) / CNNM2 (10q24.32)BOLA2 (16p11.2) / CPNE7 (16q24.3)BOLA2 (16p11.2) / DMPK (19q13.32)
BOLA2 (16p11.2) / ETFDH (4q32.1)BOLA2 (16p11.2) / FADS2 (11q12.2)BOLA2 (16p11.2) / HADHB (2p23.3)
BOLA2 (16p11.2) / LDHA (11p15.1)BOLA2 (16p11.2) / MLPH (2q37.3)BOLA2 (16p11.2) / MRPL32 (7p14.1)
BOLA2 (16p11.2) / MTDH (8q22.1)BOLA2 (16p11.2) / PDHA1 (Xp22.12)BOLA2 (16p11.2) / PFN1 (17p13.2)
BOLA2 (16p11.2) / PMPCA (9q34.3)BOLA2 (16p11.2) / RNF144A (2p25.2)BOLA2 (16p11.2) / SMIM13 (6p24.2)
BOLA2 (16p11.2) / UBAP2L (1q21.3)BOLA2 (16p11.2) / WDTC1 (1p36.11)BOLA2 (16p11.2) / YTHDF3 (8q12.3)
CASS4 (20q13.2) / BOLA2 (16p11.2)CIC (19q13.2) / BOLA2 (16p11.2)CTNNB1 (3p22.1) / BOLA2 (16p11.2)
DAZAP2 (12q13.13) / BOLA2 (16p11.2)DSTYK (1q32.1) / BOLA2 (16p11.2)FAM73A (1p31.1) / BOLA2 (16p11.2)
FLNA (Xq28) / BOLA2 (16p11.2)MIR34A (1p36.22) / BOLA2 (16p11.2)MOBP (3p22.1) / BOLA2 (16p11.2)
MYOT (5q31.2) / BOLA2 (16p11.2)NFASC (1q32.1) / BOLA2 (16p11.2)OASL (12q24.31) / BOLA2 (16p11.2)
PTPN2 (18p11.21) / BOLA2 (16p11.2)RAPGEF1 (9q34.13) / BOLA2 (16p11.2)SPARC (5q33.1) / BOLA2 (16p11.2)
TSC22D1 (13q14.11) / BOLA2 (16p11.2)ZFPM2 (8q23.1) / BOLA2 (16p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BOLA2   29488
Cards
Entrez_Gene (NCBI)BOLA2  552900  bolA family member 2
AliasesBOLA2A; BOLA2B; My016
GeneCards (Weizmann)BOLA2
Ensembl hg19 (Hinxton)ENSG00000183336 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183336 [Gene_View]  chr16:29453588-29454964 [Contig_View]  BOLA2 [Vega]
ICGC DataPortalENSG00000183336
TCGA cBioPortalBOLA2
AceView (NCBI)BOLA2
Genatlas (Paris)BOLA2
WikiGenes552900
SOURCE (Princeton)BOLA2
Genetics Home Reference (NIH)BOLA2
Genomic and cartography
GoldenPath hg38 (UCSC)BOLA2  -     chr16:29453588-29454964 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BOLA2  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblBOLA2 - 16p11.2 [CytoView hg19]  BOLA2 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIBOLA2 [Mapview hg19]  BOLA2 [Mapview hg38]
OMIM613182   
Gene and transcription
Genbank (Entrez)AF060511 AK307153 AK311534 BC022832 BC104642
RefSeq transcript (Entrez)NM_001031827 NM_001031833 NM_001320579
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BOLA2
Cluster EST : UnigeneHs.655267 [ NCBI ]
CGAP (NCI)Hs.655267
Alternative Splicing GalleryENSG00000183336
Gene ExpressionBOLA2 [ NCBI-GEO ]   BOLA2 [ EBI - ARRAY_EXPRESS ]   BOLA2 [ SEEK ]   BOLA2 [ MEM ]
Gene Expression Viewer (FireBrowse)BOLA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)552900
GTEX Portal (Tissue expression)BOLA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H3K6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H3K6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H3K6
Splice isoforms : SwissVarQ9H3K6
PhosPhoSitePlusQ9H3K6
Domains : Interpro (EBI)BolA   
Domain families : Pfam (Sanger)BolA (PF01722)   
Domain families : Pfam (NCBI)pfam01722   
Conserved Domain (NCBI)BOLA2
DMDM Disease mutations552900
Blocks (Seattle)BOLA2
SuperfamilyQ9H3K6
Human Protein AtlasENSG00000183336
Peptide AtlasQ9H3K6
IPIIPI00410226   IPI00301434   
Protein Interaction databases
DIP (DOE-UCLA)Q9H3K6
IntAct (EBI)Q9H3K6
FunCoupENSG00000183336
BioGRIDBOLA2
STRING (EMBL)BOLA2
ZODIACBOLA2
Ontologies - Pathways
QuickGOQ9H3K6
Ontology : AmiGOprotein binding  nucleus  cytoplasm  [2Fe-2S] cluster assembly  extracellular exosome  protein maturation by iron-sulfur cluster transfer  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  [2Fe-2S] cluster assembly  extracellular exosome  protein maturation by iron-sulfur cluster transfer  
NDEx NetworkBOLA2
Atlas of Cancer Signalling NetworkBOLA2
Wikipedia pathwaysBOLA2
Orthology - Evolution
OrthoDB552900
GeneTree (enSembl)ENSG00000183336
Phylogenetic Trees/Animal Genes : TreeFamBOLA2
HOVERGENQ9H3K6
HOGENOMQ9H3K6
Homologs : HomoloGeneBOLA2
Homology/Alignments : Family Browser (UCSC)BOLA2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBOLA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BOLA2
dbVarBOLA2
ClinVarBOLA2
1000_GenomesBOLA2 
Exome Variant ServerBOLA2
ExAC (Exome Aggregation Consortium)BOLA2 (select the gene name)
Genetic variants : HAPMAP552900
Genomic Variants (DGV)BOLA2 [DGVbeta]
DECIPHERBOLA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBOLA2 
Mutations
ICGC Data PortalBOLA2 
TCGA Data PortalBOLA2 
Broad Tumor PortalBOLA2
OASIS PortalBOLA2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDBOLA2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BOLA2
DgiDB (Drug Gene Interaction Database)BOLA2
DoCM (Curated mutations)BOLA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BOLA2 (select a term)
intoGenBOLA2
Cancer3DBOLA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613182   
Orphanet
MedgenBOLA2
Genetic Testing Registry BOLA2
NextProtQ9H3K6 [Medical]
TSGene552900
GENETestsBOLA2
Target ValidationBOLA2
Huge Navigator BOLA2 [HugePedia]
snp3D : Map Gene to Disease552900
BioCentury BCIQBOLA2
ClinGenBOLA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD552900
Chemical/Pharm GKB GenePA142672553
Clinical trialBOLA2
Miscellaneous
canSAR (ICR)BOLA2 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBOLA2
EVEXBOLA2
GoPubMedBOLA2
iHOPBOLA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:02:24 CEST 2017

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