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BORA (bora, aurora kinase A activator)

Identity

Alias_namesC13orf34
chromosome 13 open reading frame 34
Alias_symbol (synonym)FLJ22624
Other alias
HGNC (Hugo) BORA
LocusID (NCBI) 79866
Atlas_Id 55602
Location 13q21.33  [Link to chromosome band 13q21]
Location_base_pair Starts at 72727904 and ends at 72756198 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BORA (13q22.1) / DIS3 (13q22.1)BORA (13q22.1) / VCP (9p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BORA   24724
Cards
Entrez_Gene (NCBI)BORA  79866  bora, aurora kinase A activator
AliasesC13orf34
GeneCards (Weizmann)BORA
Ensembl hg19 (Hinxton)ENSG00000136122 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000136122 [Gene_View]  chr13:72727904-72756198 [Contig_View]  BORA [Vega]
ICGC DataPortalENSG00000136122
TCGA cBioPortalBORA
AceView (NCBI)BORA
Genatlas (Paris)BORA
WikiGenes79866
SOURCE (Princeton)BORA
Genetics Home Reference (NIH)BORA
Genomic and cartography
GoldenPath hg38 (UCSC)BORA  -     chr13:72727904-72756198 +  13q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BORA  -     13q21.33   [Description]    (hg19-Feb_2009)
EnsemblBORA - 13q21.33 [CytoView hg19]  BORA - 13q21.33 [CytoView hg38]
Mapping of homologs : NCBIBORA [Mapview hg19]  BORA [Mapview hg38]
OMIM610510   
Gene and transcription
Genbank (Entrez)AK026277 AK291496 AK298608 AK300758 BC007119
RefSeq transcript (Entrez)NM_001286746 NM_001286747 NM_024808
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BORA
Cluster EST : UnigeneHs.643464 [ NCBI ]
CGAP (NCI)Hs.643464
Alternative Splicing GalleryENSG00000136122
Gene ExpressionBORA [ NCBI-GEO ]   BORA [ EBI - ARRAY_EXPRESS ]   BORA [ SEEK ]   BORA [ MEM ]
Gene Expression Viewer (FireBrowse)BORA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79866
GTEX Portal (Tissue expression)BORA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PGQ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PGQ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PGQ7
Splice isoforms : SwissVarQ6PGQ7
PhosPhoSitePlusQ6PGQ7
Domains : Interpro (EBI)Aurora_borealis_protein   
Domain families : Pfam (Sanger)BORA_N (PF15280)   
Domain families : Pfam (NCBI)pfam15280   
Conserved Domain (NCBI)BORA
DMDM Disease mutations79866
Blocks (Seattle)BORA
SuperfamilyQ6PGQ7
Human Protein AtlasENSG00000136122
Peptide AtlasQ6PGQ7
HPRD13389
IPIIPI00937172   IPI00908886   IPI00795475   IPI00479344   
Protein Interaction databases
DIP (DOE-UCLA)Q6PGQ7
IntAct (EBI)Q6PGQ7
FunCoupENSG00000136122
BioGRIDBORA
STRING (EMBL)BORA
ZODIACBORA
Ontologies - Pathways
QuickGOQ6PGQ7
Ontology : AmiGOG2/M transition of mitotic cell cycle  protein binding  cytosol  regulation of mitotic nuclear division  protein kinase binding  regulation of protein localization  cell division  regulation of mitotic spindle organization  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  protein binding  cytosol  regulation of mitotic nuclear division  protein kinase binding  regulation of protein localization  cell division  regulation of mitotic spindle organization  
NDEx NetworkBORA
Atlas of Cancer Signalling NetworkBORA
Wikipedia pathwaysBORA
Orthology - Evolution
OrthoDB79866
GeneTree (enSembl)ENSG00000136122
Phylogenetic Trees/Animal Genes : TreeFamBORA
HOVERGENQ6PGQ7
HOGENOMQ6PGQ7
Homologs : HomoloGeneBORA
Homology/Alignments : Family Browser (UCSC)BORA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBORA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BORA
dbVarBORA
ClinVarBORA
1000_GenomesBORA 
Exome Variant ServerBORA
ExAC (Exome Aggregation Consortium)BORA (select the gene name)
Genetic variants : HAPMAP79866
Genomic Variants (DGV)BORA [DGVbeta]
DECIPHERBORA [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBORA 
Mutations
ICGC Data PortalBORA 
TCGA Data PortalBORA 
Broad Tumor PortalBORA
OASIS PortalBORA [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDBORA
BioMutasearch BORA
DgiDB (Drug Gene Interaction Database)BORA
DoCM (Curated mutations)BORA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BORA (select a term)
intoGenBORA
Cancer3DBORA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610510   
Orphanet
MedgenBORA
Genetic Testing Registry BORA
NextProtQ6PGQ7 [Medical]
TSGene79866
GENETestsBORA
Target ValidationBORA
Huge Navigator BORA [HugePedia]
snp3D : Map Gene to Disease79866
BioCentury BCIQBORA
ClinGenBORA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79866
Chemical/Pharm GKB GenePA162378045
Clinical trialBORA
Miscellaneous
canSAR (ICR)BORA (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBORA
EVEXBORA
GoPubMedBORA
iHOPBORA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:25:42 CEST 2017

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