Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

BORCS6 (BLOC-1 related complex subunit 6)

Identity

Alias_namesC17orf59
chromosome 17 open reading frame 59
Alias_symbol (synonym)FLJ20014
Other aliasPRO2472
HGNC (Hugo) BORCS6
LocusID (NCBI) 54785
Atlas_Id 77747
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 8091651 and ends at 8093564 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)BORCS6   25939
Cards
Entrez_Gene (NCBI)BORCS6  54785  BLOC-1 related complex subunit 6
AliasesC17orf59; PRO2472
GeneCards (Weizmann)BORCS6
Ensembl hg19 (Hinxton) [Gene_View]  chr17:8091651-8093564 [Contig_View]  BORCS6 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:8091651-8093564 [Contig_View]  BORCS6 [Vega]
TCGA cBioPortalBORCS6
AceView (NCBI)BORCS6
Genatlas (Paris)BORCS6
WikiGenes54785
SOURCE (Princeton)BORCS6
Genetics Home Reference (NIH)BORCS6
Genomic and cartography
GoldenPath hg19 (UCSC)BORCS6  -     chr17:8091651-8093564 -  17p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BORCS6  -     17p13.1   [Description]    (hg38-Dec_2013)
EnsemblBORCS6 - 17p13.1 [CytoView hg19]  BORCS6 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBIBORCS6 [Mapview hg19]  BORCS6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_017622
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010718 NW_004929405
Consensus coding sequences : CCDS (NCBI)BORCS6
Cluster EST : UnigeneHs.129563 [ NCBI ]
CGAP (NCI)Hs.129563
Gene ExpressionBORCS6 [ NCBI-GEO ]   BORCS6 [ EBI - ARRAY_EXPRESS ]   BORCS6 [ SEEK ]   BORCS6 [ MEM ]
Gene Expression Viewer (FireBrowse)BORCS6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54785
GTEX Portal (Tissue expression)BORCS6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BORCS6
DMDM Disease mutations54785
Blocks (Seattle)BORCS6
HPRD13368
IPIIPI00329748   IPI00009490   
Protein Interaction databases
BioGRIDBORCS6
STRING (EMBL)BORCS6
ZODIACBORCS6
Ontologies - Pathways
Huge Navigator BORCS6 [HugePedia]
snp3D : Map Gene to Disease54785
BioCentury BCIQBORCS6
ClinGenBORCS6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54785
Chemical/Pharm GKB GenePA142672242
Clinical trialBORCS6
Miscellaneous
canSAR (ICR)BORCS6 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBORCS6
EVEXBORCS6
GoPubMedBORCS6
iHOPBORCS6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:55:58 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.