Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BORCS7 (BLOC-1 related complex subunit 7)

Identity

Alias_namesC10orf32
chromosome 10 open reading frame 32
Alias_symbol (synonym)FLJ40752
Other alias
HGNC (Hugo) BORCS7
LocusID (NCBI) 119032
Atlas_Id 77723
Location 10q24.32  [Link to chromosome band 10q24]
Location_base_pair Starts at 104613967 and ends at 104624718 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BORCS7 (10q24.32) / BORCS7 (10q24.32)BORCS7 (10q24.32) / CCL28 (5p12)BORCS7 (10q24.32) / TNS4 (17q21.2)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)BORCS7   23516
Cards
Entrez_Gene (NCBI)BORCS7  119032  BLOC-1 related complex subunit 7
AliasesC10orf32
GeneCards (Weizmann)BORCS7
Ensembl hg19 (Hinxton)ENSG00000166275 [Gene_View]  chr10:104613967-104624718 [Contig_View]  BORCS7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000166275 [Gene_View]  chr10:104613967-104624718 [Contig_View]  BORCS7 [Vega]
ICGC DataPortalENSG00000166275
TCGA cBioPortalBORCS7
AceView (NCBI)BORCS7
Genatlas (Paris)BORCS7
WikiGenes119032
SOURCE (Princeton)BORCS7
Genetics Home Reference (NIH)BORCS7
Genomic and cartography
GoldenPath hg19 (UCSC)BORCS7  -     chr10:104613967-104624718 +  10q24.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BORCS7  -     10q24.32   [Description]    (hg38-Dec_2013)
EnsemblBORCS7 - 10q24.32 [CytoView hg19]  BORCS7 - 10q24.32 [CytoView hg38]
Mapping of homologs : NCBIBORCS7 [Mapview hg19]  BORCS7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001136200 NM_144591
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)BORCS7
Cluster EST : UnigeneHs.34492 [ NCBI ]
CGAP (NCI)Hs.34492
Alternative Splicing GalleryENSG00000166275
Gene ExpressionBORCS7 [ NCBI-GEO ]   BORCS7 [ EBI - ARRAY_EXPRESS ]   BORCS7 [ SEEK ]   BORCS7 [ MEM ]
Gene Expression Viewer (FireBrowse)BORCS7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)119032
GTEX Portal (Tissue expression)BORCS7
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BORCS7
DMDM Disease mutations119032
Blocks (Seattle)BORCS7
Human Protein AtlasENSG00000166275
HPRD12571
IPIIPI00303253   
Protein Interaction databases
FunCoupENSG00000166275
BioGRIDBORCS7
STRING (EMBL)BORCS7
ZODIACBORCS7
Ontologies - Pathways
Huge Navigator BORCS7 [HugePedia]
snp3D : Map Gene to Disease119032
BioCentury BCIQBORCS7
ClinGenBORCS7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD119032
Chemical/Pharm GKB GenePA134928831
Clinical trialBORCS7
Miscellaneous
canSAR (ICR)BORCS7 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBORCS7
EVEXBORCS7
GoPubMedBORCS7
iHOPBORCS7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:55:58 CET 2017

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