Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BORCS8 (BLOC-1 related complex subunit 8)

Identity

Alias_namesMEF2BNB
MEF2B neighbor
Other alias
HGNC (Hugo) BORCS8
LocusID (NCBI) 729991
Atlas_Id 77754
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 19292685 and ends at 19303400 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BORCS8 (19p13.11) / MEF2B (19p13.11)MEF2B (19p13.11) / BORCS8 (19p13.11)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)BORCS8   37247
Cards
Entrez_Gene (NCBI)BORCS8  729991  BLOC-1 related complex subunit 8
AliasesMEF2BNB
GeneCards (Weizmann)BORCS8
Ensembl hg19 (Hinxton)ENSG00000064489 [Gene_View]  chr19:19292685-19303400 [Contig_View]  BORCS8 [Vega]
Ensembl hg38 (Hinxton)ENSG00000064489 [Gene_View]  chr19:19292685-19303400 [Contig_View]  BORCS8 [Vega]
ICGC DataPortalENSG00000064489
TCGA cBioPortalBORCS8
AceView (NCBI)BORCS8
Genatlas (Paris)BORCS8
WikiGenes729991
SOURCE (Princeton)BORCS8
Genetics Home Reference (NIH)BORCS8
Genomic and cartography
GoldenPath hg19 (UCSC)BORCS8  -     chr19:19292685-19303400 -  19p13.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BORCS8  -     19p13.11   [Description]    (hg38-Dec_2013)
EnsemblBORCS8 - 19p13.11 [CytoView hg19]  BORCS8 - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBIBORCS8 [Mapview hg19]  BORCS8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001145783 NM_001145784
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)BORCS8
Cluster EST : UnigeneHs.153629 [ NCBI ]
CGAP (NCI)Hs.153629
Alternative Splicing GalleryENSG00000064489
Gene ExpressionBORCS8 [ NCBI-GEO ]   BORCS8 [ EBI - ARRAY_EXPRESS ]   BORCS8 [ SEEK ]   BORCS8 [ MEM ]
Gene Expression Viewer (FireBrowse)BORCS8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729991
GTEX Portal (Tissue expression)BORCS8
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BORCS8
DMDM Disease mutations729991
Blocks (Seattle)BORCS8
Human Protein AtlasENSG00000064489
IPIIPI00386642   IPI00816037   
Protein Interaction databases
FunCoupENSG00000064489
BioGRIDBORCS8
STRING (EMBL)BORCS8
ZODIACBORCS8
Ontologies - Pathways
Huge Navigator BORCS8 [HugePedia]
snp3D : Map Gene to Disease729991
BioCentury BCIQBORCS8
ClinGenBORCS8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729991
Clinical trialBORCS8
Miscellaneous
canSAR (ICR)BORCS8 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBORCS8
EVEXBORCS8
GoPubMedBORCS8
iHOPBORCS8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:55:58 CET 2017

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