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BPGM (2,3-bisphosphoglycerate mutase)

Identity

Other namesDPGM
HGNC (Hugo) BPGM
LocusID (NCBI) 669
Location 7q33
Location_base_pair Starts at 134331531 and ends at 134364567 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)BPGM   1093
Entrez_Gene (NCBI)BPGM  669  2,3-bisphosphoglycerate mutase
Cards
GeneCards (Weizmann)BPGM
Ensembl (Hinxton)ENSG00000172331 [Gene_View]  chr7:134331531-134364567 [Contig_View]  BPGM [Vega]
AceView (NCBI)BPGM
Genatlas (Paris)BPGM
SOURCE (Stanford)NM_001724 NM_199186
Genomic and cartography
GoldenPath (UCSC)BPGM  -  7q33   chr7:134331531-134364567 +  7q33   [Description]    (hg19-Feb_2009)
EnsemblBPGM - 7q33 [CytoView]
Mapping of homologs : NCBIBPGM [Mapview]
OMIM222800   613896   
Gene and transcription
Genbank (Entrez)AB209044 AK097778 AK315439 BC017050 BM090687
RefSeq transcript (SRS)NM_001724 NM_199186
RefSeq transcript (Entrez)NM_001724 NM_199186
RefSeq genomic (SRS)AC_000068 AC_000139 NC_000007 NC_018918 NG_012921 NT_007933 NT_079596 NW_001839072 NW_004078032
RefSeq genomic (Entrez)AC_000068 AC_000139 NC_000007 NC_018918 NG_012921 NT_007933 NT_079596 NW_001839072 NW_004078032
Consensus coding sequences : CCDS (NCBI)BPGM
Cluster EST : UnigeneHs.198365 [ SRS ] Hs.198365 [ NCBI ]
CGAP (NCI)Hs.198365
Alternative Splicing : Fast-db (Paris)GSHG0027750
Alternative Splicing GalleryENSG00000172331
Gene ExpressionBPGM [ NCBI-GEO ]   BPGM [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP07738 (SRS) P07738 (Uniprot)
NextProtP07738
With graphics : InterProP07738
Splice isoforms : SwissVarP07738(Swissvar)
Domaine pattern : Prosite (SRS)PG_MUTASE (PS00175)   
Domaine pattern : Prosite (Expaxy)PG_MUTASE (PS00175)   
Domains : Interpro (SRS)His_Pase_superF_clade-1    PG/BPGM_mutase_AS    Phosphogly_mut1   
Domains : Interpro (EBI)His_Pase_superF_clade-1    PG/BPGM_mutase_AS    Phosphogly_mut1   
Related proteins : CluSTrP07738
Domain families : Pfam (SRS)His_Phos_1 (PF00300)   
Domain families : Pfam (Sanger)His_Phos_1 (PF00300)   
Domain families : Pfam (NCBI)pfam00300   
Domain families : Smart (EMBL)PGAM (SM00855)  
DMDM669
Blocks (Seattle)P07738
PDB (SRS)1T8P    2A9J    2F90    2H4X    2H4Z    2H52    2HHJ    3NFY   
PDB (PDBSum)1T8P    2A9J    2F90    2H4X    2H4Z    2H52    2HHJ    3NFY   
PDB (IMB)1T8P    2A9J    2F90    2H4X    2H4Z    2H52    2HHJ    3NFY   
PDB (RSDB)1T8P    2A9J    2F90    2H4X    2H4Z    2H52    2HHJ    3NFY   
Human Protein AtlasENSG00000172331
HPRD01961
IPIIPI00215979   IPI00556284   
Protein Interaction databases
DIP (DOE-UCLA)P07738
IntAct (EBI)P07738
FunCoupENSG00000172331
REACTOMEBPGM
Protein Interaction Database669
BioGRIDBPGM
InParanoidP07738
Interologous Interaction database P07738
IntegromeDBBPGM
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)BPGM
SNP (GeneSNP Utah)BPGM
SNP : HGBaseBPGM
Genetic variants : HAPMAPBPGM
Somatic Mutations in Cancer : COSMICBPGM 
CONAN: Copy Number AnalysisBPGM 
Mutations and Diseases : HGMDBPGM
OMIM222800    613896   
GENETests222800    613896   
Disease Genetic AssociationBPGM
Huge Navigator BPGM [HugePedia]  BPGM [HugeCancerGEM]
Genomic VariantsBPGM  BPGM [DGVbeta]
snp3D : Map Gene to Disease669
General knowledge
Homologs : HomoloGeneBPGM
Homology/Alignments : Family Browser (UCSC)BPGM
Phylogenetic Trees/Animal Genes : TreeFamBPGM
Catalytic activity : Enzyme5.4.2.4 [ Enzyme-Expasy ]   5.4.2.4 [ Enzyme-SRS ]   5.4.2.4 [ IntEnz-EBI ]   5.4.2.4 [ BRENDA ]   5.4.2.4 [ KEGG ]   
Chemical/Protein Interactions : CTD669
Chemical/Pharm GKB GenePA25401
Clinical trialBPGM
Cancer Resource (Charite)ENSG00000172331
Ontology : AmiGObisphosphoglycerate mutase activity  bisphosphoglycerate 2-phosphatase activity  phosphoglycerate mutase activity  carbohydrate metabolic process  glycolysis  respiratory gaseous exchange  erythrocyte development  
Ontology : EGO-EBIbisphosphoglycerate mutase activity  bisphosphoglycerate 2-phosphatase activity  phosphoglycerate mutase activity  carbohydrate metabolic process  glycolysis  respiratory gaseous exchange  erythrocyte development  
Pathways : KEGGGlycolysis / Gluconeogenesis
Other databases
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
PubGeneBPGM
iHOPBPGM
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:43:34 CEST 2013
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