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BPI (bactericidal permeability increasing protein)

Identity

Alias (NCBI)BPIFD1
rBPI
HGNC (Hugo) BPI
HGNC Alias symbBPIFD1
HGNC Alias nameBPI fold containing family D, member 1
HGNC Previous namebactericidal/permeability-increasing protein
LocusID (NCBI) 671
Atlas_Id 50410
Location 20q11.23  [Link to chromosome band 20q11]
Location_base_pair Starts at 38304156 and ends at 38337505 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DLGAP4 (20q11.23) / BPI (20q11.23)GTF2B (1p22.2) / BPI (20q11.23)SSH2 (17q11.2) / BPI (20q11.23)
DLGAP4 20q11.23 / BPI 20q11.23GTF2B 1p22.2 / BPI 20q11.23

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)BPI   1095
Cards
Entrez_Gene (NCBI)BPI    bactericidal permeability increasing protein
AliasesBPIFD1; rBPI
GeneCards (Weizmann)BPI
Ensembl hg19 (Hinxton)ENSG00000101425 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000101425 [Gene_View]  ENSG00000101425 [Sequence]  chr20:38304156-38337505 [Contig_View]  BPI [Vega]
ICGC DataPortalENSG00000101425
TCGA cBioPortalBPI
AceView (NCBI)BPI
Genatlas (Paris)BPI
SOURCE (Princeton)BPI
Genetics Home Reference (NIH)BPI
Genomic and cartography
GoldenPath hg38 (UCSC)BPI  -     chr20:38304156-38337505 +  20q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BPI  -     20q11.23   [Description]    (hg19-Feb_2009)
GoldenPathBPI - 20q11.23 [CytoView hg19]  BPI - 20q11.23 [CytoView hg38]
ImmunoBaseENSG00000101425
genome Data Viewer NCBIBPI [Mapview hg19]  
OMIM109195   
Gene and transcription
Genbank (Entrez)AF322588 AI436120 AK296568 AK315328 AX713278
RefSeq transcript (Entrez)NM_001725
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BPI
Alternative Splicing GalleryENSG00000101425
Gene ExpressionBPI [ NCBI-GEO ]   BPI [ EBI - ARRAY_EXPRESS ]   BPI [ SEEK ]   BPI [ MEM ]
Gene Expression Viewer (FireBrowse)BPI [ Firebrowse - Broad ]
GenevisibleExpression of BPI in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)671
GTEX Portal (Tissue expression)BPI
Human Protein AtlasENSG00000101425-BPI [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BPI
Blocks (Seattle)BPI
Human Protein Atlas [tissue]ENSG00000101425-BPI [tissue]
HPRD00174
IPIIPI00827847   IPI00552280   IPI00791618   IPI00795844   
Protein Interaction databases
BioGRIDBPI
STRING (EMBL)BPI
ZODIACBPI
Ontologies - Pathways
Litterature
PubMed66 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXBPI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:12:57 CET 2021

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