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BPNT1 (3'(2'), 5'-bisphosphate nucleotidase 1)

Identity

Alias (NCBI)HEL20
PIP
HGNC (Hugo) BPNT1
LocusID (NCBI) 10380
Atlas_Id 60798
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 220057482 and ends at 220089788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)BPNT1   1096
Cards
Entrez_Gene (NCBI)BPNT1    3'(2'), 5'-bisphosphate nucleotidase 1
AliasesHEL20; PIP
GeneCards (Weizmann)BPNT1
Ensembl hg19 (Hinxton)ENSG00000162813 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162813 [Gene_View]  ENSG00000162813 [Sequence]  chr1:220057482-220089788 [Contig_View]  BPNT1 [Vega]
ICGC DataPortalENSG00000162813
TCGA cBioPortalBPNT1
AceView (NCBI)BPNT1
Genatlas (Paris)BPNT1
SOURCE (Princeton)BPNT1
Genetics Home Reference (NIH)BPNT1
Genomic and cartography
GoldenPath hg38 (UCSC)BPNT1  -     chr1:220057482-220089788 -  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BPNT1  -     1q41   [Description]    (hg19-Feb_2009)
GoldenPathBPNT1 - 1q41 [CytoView hg19]  BPNT1 - 1q41 [CytoView hg38]
ImmunoBaseENSG00000162813
Genome Data Viewer NCBIBPNT1 [Mapview hg19]  
OMIM604053   
Gene and transcription
Genbank (Entrez)AF125042 AJ249339 AK021941 AK291943 AK298476
RefSeq transcript (Entrez)NM_001286149 NM_001286150 NM_001286151 NM_006085
Consensus coding sequences : CCDS (NCBI)BPNT1
Gene ExpressionBPNT1 [ NCBI-GEO ]   BPNT1 [ EBI - ARRAY_EXPRESS ]   BPNT1 [ SEEK ]   BPNT1 [ MEM ]
Gene Expression Viewer (FireBrowse)BPNT1 [ Firebrowse - Broad ]
GenevisibleExpression of BPNT1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10380
GTEX Portal (Tissue expression)BPNT1
Human Protein AtlasENSG00000162813-BPNT1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95861   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95861  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95861
Catalytic activity : Enzyme3.1.3.7 [ Enzyme-Expasy ]   3.1.3.73.1.3.7 [ IntEnz-EBI ]   3.1.3.7 [ BRENDA ]   3.1.3.7 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusO95861
Domaine pattern : Prosite (Expaxy)IMP_1 (PS00629)    IMP_2 (PS00630)   
Domains : Interpro (EBI)Inositol_monoP_metal-BS    Inositol_monophosphatase-like    Inositol_monophosphatase_CS   
Domain families : Pfam (Sanger)Inositol_P (PF00459)   
Domain families : Pfam (NCBI)pfam00459   
Conserved Domain (NCBI)BPNT1
PDB (RSDB)2WEF   
PDB Europe2WEF   
PDB (PDBSum)2WEF   
PDB (IMB)2WEF   
Structural Biology KnowledgeBase2WEF   
SCOP (Structural Classification of Proteins)2WEF   
CATH (Classification of proteins structures)2WEF   
SuperfamilyO95861
AlphaFold pdb e-kbO95861   
Human Protein Atlas [tissue]ENSG00000162813-BPNT1 [tissue]
HPRD06814
Protein Interaction databases
DIP (DOE-UCLA)O95861
IntAct (EBI)O95861
BioGRIDBPNT1
STRING (EMBL)BPNT1
ZODIACBPNT1
Ontologies - Pathways
QuickGOO95861
Ontology : AmiGOcytosol  nucleobase-containing compound metabolic process  nervous system development  3'(2'),5'-bisphosphate nucleotidase activity  phosphatidylinositol phosphate biosynthetic process  inositol phosphate dephosphorylation  metal ion binding  3'-phosphoadenosine 5'-phosphosulfate metabolic process  
Ontology : EGO-EBIcytosol  nucleobase-containing compound metabolic process  nervous system development  3'(2'),5'-bisphosphate nucleotidase activity  phosphatidylinositol phosphate biosynthetic process  inositol phosphate dephosphorylation  metal ion binding  3'-phosphoadenosine 5'-phosphosulfate metabolic process  
Pathways : KEGGSulfur metabolism   
NDEx NetworkBPNT1
Atlas of Cancer Signalling NetworkBPNT1
Wikipedia pathwaysBPNT1
Orthology - Evolution
OrthoDB10380
GeneTree (enSembl)ENSG00000162813
Phylogenetic Trees/Animal Genes : TreeFamBPNT1
Homologs : HomoloGeneBPNT1
Homology/Alignments : Family Browser (UCSC)BPNT1
Gene fusions - Rearrangements
Fusion : QuiverBPNT1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBPNT1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BPNT1
dbVarBPNT1
ClinVarBPNT1
MonarchBPNT1
1000_GenomesBPNT1 
Exome Variant ServerBPNT1
GNOMAD BrowserENSG00000162813
Varsome BrowserBPNT1
ACMGBPNT1 variants
VarityO95861
Genomic Variants (DGV)BPNT1 [DGVbeta]
DECIPHERBPNT1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBPNT1 
Mutations
ICGC Data PortalBPNT1 
TCGA Data PortalBPNT1 
Broad Tumor PortalBPNT1
OASIS PortalBPNT1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBPNT1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DBPNT1
Mutations and Diseases : HGMDBPNT1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaBPNT1
DgiDB (Drug Gene Interaction Database)BPNT1
DoCM (Curated mutations)BPNT1
CIViC (Clinical Interpretations of Variants in Cancer)BPNT1
Cancer3DBPNT1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604053   
Orphanet
DisGeNETBPNT1
MedgenBPNT1
Genetic Testing Registry BPNT1
NextProtO95861 [Medical]
GENETestsBPNT1
Target ValidationBPNT1
Huge Navigator BPNT1 [HugePedia]
ClinGenBPNT1
Clinical trials, drugs, therapy
MyCancerGenomeBPNT1
Protein Interactions : CTDBPNT1
Pharm GKB GenePA25407
PharosO95861
Clinical trialBPNT1
Miscellaneous
canSAR (ICR)BPNT1
HarmonizomeBPNT1
DataMed IndexBPNT1
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXBPNT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:43:31 CEST 2021

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