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BRCAT107 (breast cancer-associated transcript 107)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 102723839
Atlas_Id 55269
Location 5p12  [Link to chromosome band 5p12]
Location_base_pair Starts at 44495246 and ends at 44510384 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)BRCAT107  102723839  breast cancer-associated transcript 107
Aliases
GeneCards (Weizmann)BRCAT107
Ensembl hg19 (Hinxton) [Gene_View]  chr5:44495246-44510384 [Contig_View]  BRCAT107 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:44495246-44510384 [Contig_View]  BRCAT107 [Vega]
TCGA cBioPortalBRCAT107
AceView (NCBI)BRCAT107
Genatlas (Paris)BRCAT107
WikiGenes102723839
SOURCE (Princeton)BRCAT107
Genetics Home Reference (NIH)BRCAT107
Genomic and cartography
GoldenPath hg19 (UCSC)BRCAT107  -     chr5:44495246-44510384 -  5p12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BRCAT107  -     5p12   [Description]    (hg38-Dec_2013)
EnsemblBRCAT107 - 5p12 [CytoView hg19]  BRCAT107 - 5p12 [CytoView hg38]
Mapping of homologs : NCBIBRCAT107 [Mapview hg19]  BRCAT107 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG184326 BG200391 DB000670 DB005812 HG497935
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)BRCAT107
Cluster EST : UnigeneHs.561412 [ NCBI ]
CGAP (NCI)Hs.561412
Gene ExpressionBRCAT107 [ NCBI-GEO ]   BRCAT107 [ EBI - ARRAY_EXPRESS ]   BRCAT107 [ SEEK ]   BRCAT107 [ MEM ]
Gene Expression Viewer (FireBrowse)BRCAT107 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723839
GTEX Portal (Tissue expression)BRCAT107
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BRCAT107
DMDM Disease mutations102723839
Blocks (Seattle)BRCAT107
Protein Interaction databases
BioGRIDBRCAT107
STRING (EMBL)BRCAT107
ZODIACBRCAT107
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease102723839
BioCentury BCIQBRCAT107
ClinGenBRCAT107
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723839
Clinical trialBRCAT107
Miscellaneous
canSAR (ICR)BRCAT107 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBRCAT107
EVEXBRCAT107
GoPubMedBRCAT107
iHOPBRCAT107
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:57:47 CET 2017

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