Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BRCC3 (BRCA1/BRCA2-containing complex subunit 3)

Identity

Alias (NCBI)BRCC36
C6.1A
CXorf53
HGNC (Hugo) BRCC3
HGNC Alias symbC6.1A
BRCC36
HGNC Alias nameLys-63-specific deubiquitinase
HGNC Previous nameCXorf53
HGNC Previous namechromosome X open reading frame 53
 BRCA1/BRCA2-containing complex, subunit 3
LocusID (NCBI) 79184
Atlas_Id 50949
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 155071420 and ends at 155123074 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BRCC3 (Xq28)::FUNDC2 (Xq28)BRCC3 (Xq28)::TRA ()VBP1 (Xq28)::BRCC3 (Xq28)
VBP1 Xq28::BRCC3 Xq28

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)BRCC3   24185
Cards
Entrez_Gene (NCBI)BRCC3    BRCA1/BRCA2-containing complex subunit 3
AliasesBRCC36; C6.1A; CXorf53
GeneCards (Weizmann)BRCC3
Ensembl hg19 (Hinxton)ENSG00000185515 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185515 [Gene_View]  ENSG00000185515 [Sequence]  chrX:155071420-155123074 [Contig_View]  BRCC3 [Vega]
ICGC DataPortalENSG00000185515
TCGA cBioPortalBRCC3
AceView (NCBI)BRCC3
Genatlas (Paris)BRCC3
SOURCE (Princeton)BRCC3
Genetics Home Reference (NIH)BRCC3
Genomic and cartography
GoldenPath hg38 (UCSC)BRCC3  -     chrX:155071420-155123074 +  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BRCC3  -     Xq28   [Description]    (hg19-Feb_2009)
GoldenPathBRCC3 - Xq28 [CytoView hg19]  BRCC3 - Xq28 [CytoView hg38]
ImmunoBaseENSG00000185515
Genome Data Viewer NCBIBRCC3 [Mapview hg19]  
OMIM300617   
Gene and transcription
Genbank (Entrez)AK298886 AK299194 AK310286 AK313544 AY438030
RefSeq transcript (Entrez)NM_001018055 NM_001242640 NM_024332
Consensus coding sequences : CCDS (NCBI)BRCC3
Gene ExpressionBRCC3 [ NCBI-GEO ]   BRCC3 [ EBI - ARRAY_EXPRESS ]   BRCC3 [ SEEK ]   BRCC3 [ MEM ]
Gene Expression Viewer (FireBrowse)BRCC3 [ Firebrowse - Broad ]
GenevisibleExpression of BRCC3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79184
GTEX Portal (Tissue expression)BRCC3
Human Protein AtlasENSG00000185515-BRCC3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BRCC3
Human Protein Atlas [tissue]ENSG00000185515-BRCC3 [tissue]
HPRD06465
Protein Interaction databases
BioGRIDBRCC3
STRING (EMBL)BRCC3
ZODIACBRCC3
Ontologies - Pathways
Litterature
PubMed93 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXBRCC3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 12:24:44 CET 2022

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