Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

BRF1 (BRF1 RNA polymerase III transcription initiation factor subunit)

Identity

Alias (NCBI)BRF
BRF-1
CFDS
GTF3B
HEL-S-76p
TAF3B2
TAF3C
TAFIII90
TF3B90
TFIIIB90
hBRF
HGNC (Hugo) BRF1
HGNC Alias symbTFIIIB90
BRF
hBRF
HGNC Previous nameTAF3B2
 TAF3C
 GTF3B
HGNC Previous nameTATA box binding protein (TBP)-associated factor, RNA polymerase III, GTF3B subunit 2
 BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)
 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
LocusID (NCBI) 2972
Atlas_Id 50104
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 105209286 and ends at 105247885 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BRF1 (14q32.33) / FOXN3 (14q31.3)BRF1 (14q32.33) / GYS1 (19q13.33)BRF1 (14q32.33) / IFT88 (13q12.11)
CST3 (20p11.21) / BRF1 (14q32.33)UNC79 (14q32.12) / BRF1 (14q32.33)BRF1 14q32.33 / FOXN3 14q31.3
KIAA1409 BRF1 14q32.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)BRF1   11551
Cards
Entrez_Gene (NCBI)BRF1    BRF1 RNA polymerase III transcription initiation factor subunit
AliasesBRF; BRF-1; CFDS; GTF3B; 
HEL-S-76p; TAF3B2; TAF3C; TAFIII90; TF3B90; TFIIIB90; hBRF
GeneCards (Weizmann)BRF1
Ensembl hg19 (Hinxton)ENSG00000185024 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185024 [Gene_View]  ENSG00000185024 [Sequence]  chr14:105209286-105247885 [Contig_View]  BRF1 [Vega]
ICGC DataPortalENSG00000185024
TCGA cBioPortalBRF1
AceView (NCBI)BRF1
Genatlas (Paris)BRF1
SOURCE (Princeton)BRF1
Genetics Home Reference (NIH)BRF1
Genomic and cartography
GoldenPath hg38 (UCSC)BRF1  -     chr14:105209286-105247885 -  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BRF1  -     14q32.33   [Description]    (hg19-Feb_2009)
GoldenPathBRF1 - 14q32.33 [CytoView hg19]  BRF1 - 14q32.33 [CytoView hg38]
ImmunoBaseENSG00000185024
Genome Data Viewer NCBIBRF1 [Mapview hg19]  
OMIM604902   616202   
Gene and transcription
Genbank (Entrez)AJ297406 AJ297407 AJ297408 AK096471 AK124665
RefSeq transcript (Entrez)NM_001242786 NM_001242787 NM_001242788 NM_001242789 NM_001242790 NM_001519 NM_145685 NM_145696
Consensus coding sequences : CCDS (NCBI)BRF1
Gene ExpressionBRF1 [ NCBI-GEO ]   BRF1 [ EBI - ARRAY_EXPRESS ]   BRF1 [ SEEK ]   BRF1 [ MEM ]
Gene Expression Viewer (FireBrowse)BRF1 [ Firebrowse - Broad ]
GenevisibleExpression of BRF1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2972
GTEX Portal (Tissue expression)BRF1
Human Protein AtlasENSG00000185024-BRF1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BRF1
Human Protein Atlas [tissue]ENSG00000185024-BRF1 [tissue]
HPRD05361
Protein Interaction databases
BioGRIDBRF1
STRING (EMBL)BRF1
ZODIACBRF1
Ontologies - Pathways
Litterature
PubMed62 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXBRF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:01:27 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.