Atlas of Genetics and Cytogenetics in Oncology and Haematology

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BSPRY (B-box and SPRY domain containing)

Identity

Alias (NCBI)-
HGNC (Hugo) BSPRY
HGNC Alias symbFLJ20150
LocusID (NCBI) 54836
Atlas_Id 57027
Location 9q32  [Link to chromosome band 9q32]
Location_base_pair Starts at 113349541 and ends at 113371222 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BSPRY (9q32) / NPM1 (5q35.1)DIDO1 (20q13.33) / BSPRY (9q32)RGS3 (9q32) / BSPRY (9q32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(5;9)(q35;q32) BSPRY/NPM1

External links

Nomenclature
HGNC (Hugo)BSPRY   18232
Cards
Entrez_Gene (NCBI)BSPRY    B-box and SPRY domain containing
Aliases
GeneCards (Weizmann)BSPRY
Ensembl hg19 (Hinxton)ENSG00000119411 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119411 [Gene_View]  ENSG00000119411 [Sequence]  chr9:113349541-113371222 [Contig_View]  BSPRY [Vega]
ICGC DataPortalENSG00000119411
TCGA cBioPortalBSPRY
AceView (NCBI)BSPRY
Genatlas (Paris)BSPRY
SOURCE (Princeton)BSPRY
Genetics Home Reference (NIH)BSPRY
Genomic and cartography
GoldenPath hg38 (UCSC)BSPRY  -     chr9:113349541-113371222 +  9q32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BSPRY  -     9q32   [Description]    (hg19-Feb_2009)
GoldenPathBSPRY - 9q32 [CytoView hg19]  BSPRY - 9q32 [CytoView hg38]
ImmunoBaseENSG00000119411
genome Data Viewer NCBIBSPRY [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AJ276691 AK000157 AK092607 BC001477 BP370567
RefSeq transcript (Entrez)NM_001317943 NM_001317944 NM_017688
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BSPRY
Alternative Splicing GalleryENSG00000119411
Gene ExpressionBSPRY [ NCBI-GEO ]   BSPRY [ EBI - ARRAY_EXPRESS ]   BSPRY [ SEEK ]   BSPRY [ MEM ]
Gene Expression Viewer (FireBrowse)BSPRY [ Firebrowse - Broad ]
GenevisibleExpression of BSPRY in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54836
GTEX Portal (Tissue expression)BSPRY
Human Protein AtlasENSG00000119411-BSPRY [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5W0U4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5W0U4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5W0U4
Splice isoforms : SwissVarQ5W0U4
PhosPhoSitePlusQ5W0U4
Domaine pattern : Prosite (Expaxy)B302_SPRY (PS50188)   
Domains : Interpro (EBI)B30.2/SPRY    Butyrophylin_SPRY    ConA-like_dom_sf    PRY    SPRY_dom    Znf_B-box   
Domain families : Pfam (Sanger)PRY (PF13765)    SPRY (PF00622)   
Domain families : Pfam (NCBI)pfam13765    pfam00622   
Domain families : Smart (EMBL)PRY (SM00589)  SPRY (SM00449)  
Conserved Domain (NCBI)BSPRY
Blocks (Seattle)BSPRY
SuperfamilyQ5W0U4
Human Protein Atlas [tissue]ENSG00000119411-BSPRY [tissue]
Peptide AtlasQ5W0U4
IPIIPI00301791   IPI00185568   
Protein Interaction databases
DIP (DOE-UCLA)Q5W0U4
IntAct (EBI)Q5W0U4
BioGRIDBSPRY
STRING (EMBL)BSPRY
ZODIACBSPRY
Ontologies - Pathways
QuickGOQ5W0U4
Ontology : AmiGOcytoplasm  calcium ion transport  zinc ion binding  membrane  protein ubiquitination  cell leading edge  perinuclear region of cytoplasm  ubiquitin protein ligase activity  cellular response to leukemia inhibitory factor  
Ontology : EGO-EBIcytoplasm  calcium ion transport  zinc ion binding  membrane  protein ubiquitination  cell leading edge  perinuclear region of cytoplasm  ubiquitin protein ligase activity  cellular response to leukemia inhibitory factor  
NDEx NetworkBSPRY
Atlas of Cancer Signalling NetworkBSPRY
Wikipedia pathwaysBSPRY
Orthology - Evolution
OrthoDB54836
GeneTree (enSembl)ENSG00000119411
Phylogenetic Trees/Animal Genes : TreeFamBSPRY
HOGENOMQ5W0U4
Homologs : HomoloGeneBSPRY
Homology/Alignments : Family Browser (UCSC)BSPRY
Gene fusions - Rearrangements
Fusion : QuiverBSPRY
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBSPRY [hg38]
dbVarBSPRY
ClinVarBSPRY
MonarchBSPRY
1000_GenomesBSPRY 
Exome Variant ServerBSPRY
GNOMAD BrowserENSG00000119411
Varsome BrowserBSPRY
Genomic Variants (DGV)BSPRY [DGVbeta]
DECIPHERBSPRY [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBSPRY 
Mutations
ICGC Data PortalBSPRY 
TCGA Data PortalBSPRY 
Broad Tumor PortalBSPRY
OASIS PortalBSPRY [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBSPRY  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DBSPRY
Mutations and Diseases : HGMDBSPRY
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BSPRY
DgiDB (Drug Gene Interaction Database)BSPRY
DoCM (Curated mutations)BSPRY (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BSPRY (select a term)
intoGenBSPRY
Cancer3DBSPRY(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETBSPRY
MedgenBSPRY
Genetic Testing Registry BSPRY
NextProtQ5W0U4 [Medical]
GENETestsBSPRY
Target ValidationBSPRY
Huge Navigator BSPRY [HugePedia]
ClinGenBSPRY
Clinical trials, drugs, therapy
MyCancerGenomeBSPRY
Protein Interactions : CTD
Pharm GKB GenePA134979106
PharosQ5W0U4
Clinical trialBSPRY
Miscellaneous
canSAR (ICR)BSPRY (select the gene name)
HarmonizomeBSPRY
DataMed IndexBSPRY
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXBSPRY
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Fri Jan 1 18:07:33 CET 2021
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