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BTBD9-AS1 (BTBD9 antisense RNA 1)

Identity

Alias_namesBTBD9 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) BTBD9-AS1
LocusID (NCBI) 101929425
Atlas_Id 79290
Location 6p21.2  [Link to chromosome band 6p21]
Location_base_pair Starts at 38481596 and ends at 38482527 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BTBD9-AS1   40959
Cards
Entrez_Gene (NCBI)BTBD9-AS1  101929425  BTBD9 antisense RNA 1
Aliases
GeneCards (Weizmann)BTBD9-AS1
Ensembl hg19 (Hinxton)ENSG00000226533 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226533 [Gene_View]  ENSG00000226533 [Sequence]  chr6:38481596-38482527 [Contig_View]  BTBD9-AS1 [Vega]
ICGC DataPortalENSG00000226533
TCGA cBioPortalBTBD9-AS1
AceView (NCBI)BTBD9-AS1
Genatlas (Paris)BTBD9-AS1
WikiGenes101929425
SOURCE (Princeton)BTBD9-AS1
Genetics Home Reference (NIH)BTBD9-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)BTBD9-AS1  -     chr6:38481596-38482527 +  6p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BTBD9-AS1  -     6p21.2   [Description]    (hg19-Feb_2009)
EnsemblBTBD9-AS1 - 6p21.2 [CytoView hg19]  BTBD9-AS1 - 6p21.2 [CytoView hg38]
Mapping of homologs : NCBIBTBD9-AS1 [Mapview hg19]  BTBD9-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX101050
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BTBD9-AS1
Cluster EST : UnigeneHs.665280 [ NCBI ]
CGAP (NCI)Hs.665280
Alternative Splicing GalleryENSG00000226533
Gene ExpressionBTBD9-AS1 [ NCBI-GEO ]   BTBD9-AS1 [ EBI - ARRAY_EXPRESS ]   BTBD9-AS1 [ SEEK ]   BTBD9-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)BTBD9-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929425
GTEX Portal (Tissue expression)BTBD9-AS1
Human Protein AtlasENSG00000226533-BTBD9-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BTBD9-AS1
DMDM Disease mutations101929425
Blocks (Seattle)BTBD9-AS1
Human Protein Atlas [tissue]ENSG00000226533-BTBD9-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000226533
BioGRIDBTBD9-AS1
STRING (EMBL)BTBD9-AS1
ZODIACBTBD9-AS1
Ontologies - Pathways
Huge Navigator BTBD9-AS1 [HugePedia]
snp3D : Map Gene to Disease101929425
BioCentury BCIQBTBD9-AS1
ClinGenBTBD9-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929425
Clinical trialBTBD9-AS1
Miscellaneous
canSAR (ICR)BTBD9-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineBTBD9-AS1
EVEXBTBD9-AS1
GoPubMedBTBD9-AS1
iHOPBTBD9-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:37:08 CEST 2018

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