Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BTF3P11 (basic transcription factor 3 pseudogene 11)

Identity

Alias_namesBTF3L1
basic transcription factor 3, like 1
basic transcription factor 3-like 1, pseudogene
basic transcription factor 3, like 1 pseudogene
Alias_symbol (synonym)HUMBTFB
TNFRSF11B
OPG
OCIF
Other alias
HGNC (Hugo) BTF3P11
LocusID (NCBI) 690
Atlas_Id 60833
Location 13q22.3  [Link to chromosome band 13q22]
Location_base_pair Starts at 77502585 and ends at 77503224 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BTF3P11   1126
Cards
Entrez_Gene (NCBI)BTF3P11  690  basic transcription factor 3 pseudogene 11
AliasesBTF3L1; HUMBTFB; OCIF; OPG; 
TNFRSF11B
GeneCards (Weizmann)BTF3P11
Ensembl hg19 (Hinxton) [Gene_View]  chr13:77502585-77503224 [Contig_View]  BTF3P11 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:77502585-77503224 [Contig_View]  BTF3P11 [Vega]
TCGA cBioPortalBTF3P11
AceView (NCBI)BTF3P11
Genatlas (Paris)BTF3P11
WikiGenes690
SOURCE (Princeton)BTF3P11
Genetics Home Reference (NIH)BTF3P11
Genomic and cartography
GoldenPath hg19 (UCSC)BTF3P11  -     chr13:77502585-77503224 +  13q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BTF3P11  -     13q22.3   [Description]    (hg38-Dec_2013)
EnsemblBTF3P11 - 13q22.3 [CytoView hg19]  BTF3P11 - 13q22.3 [CytoView hg38]
Mapping of homologs : NCBIBTF3P11 [Mapview hg19]  BTF3P11 [Mapview hg38]
OMIM602543   
Gene and transcription
Genbank (Entrez)BC106717 BC106718 BC115358
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NG_004671 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)BTF3P11
Cluster EST : UnigeneHs.567241 [ NCBI ]
CGAP (NCI)Hs.567241
Gene ExpressionBTF3P11 [ NCBI-GEO ]   BTF3P11 [ EBI - ARRAY_EXPRESS ]   BTF3P11 [ SEEK ]   BTF3P11 [ MEM ]
Gene Expression Viewer (FireBrowse)BTF3P11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)690
GTEX Portal (Tissue expression)BTF3P11
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BTF3P11
DMDM Disease mutations690
Blocks (Seattle)BTF3P11
IPIIPI00015943   
Protein Interaction databases
BioGRIDBTF3P11
STRING (EMBL)BTF3P11
ZODIACBTF3P11
Ontologies - Pathways
Huge Navigator BTF3P11 [HugePedia]
snp3D : Map Gene to Disease690
BioCentury BCIQBTF3P11
ClinGenBTF3P11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD690
Chemical/Pharm GKB GenePA25446
Clinical trialBTF3P11
Miscellaneous
canSAR (ICR)BTF3P11 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBTF3P11
EVEXBTF3P11
GoPubMedBTF3P11
iHOPBTF3P11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:56:08 CET 2017

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