Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BTF3P11 (basic transcription factor 3 pseudogene 11)

Identity

Alias (NCBI)BTF3L1
HUMBTFB
OCIF
OPG
TNFRSF11B
HGNC (Hugo) BTF3P11
HGNC Alias symbHUMBTFB
TNFRSF11B
OPG
OCIF
HGNC Alias namelambda h27A
 BTF3 homologue
HGNC Previous nameBTF3L1
HGNC Previous namebasic transcription factor 3, like 1
 basic transcription factor 3-like 1, pseudogene
 basic transcription factor 3, like 1 pseudogene
LocusID (NCBI) 690
Atlas_Id 60833
Location 13q22.3  [Link to chromosome band 13q22]
Location_base_pair Starts at 76928451 and ends at 76929090 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BTF3P11   1126
Cards
Entrez_Gene (NCBI)BTF3P11  690  basic transcription factor 3 pseudogene 11
AliasesBTF3L1; HUMBTFB; OCIF; OPG; 
TNFRSF11B
GeneCards (Weizmann)BTF3P11
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr13:76928451-76929090 [Contig_View]  BTF3P11 [Vega]
TCGA cBioPortalBTF3P11
AceView (NCBI)BTF3P11
Genatlas (Paris)BTF3P11
WikiGenes690
SOURCE (Princeton)BTF3P11
Genetics Home Reference (NIH)BTF3P11
Genomic and cartography
GoldenPath hg38 (UCSC)BTF3P11  -     chr13:76928451-76929090 +  13q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BTF3P11  -     13q22.3   [Description]    (hg19-Feb_2009)
GoldenPathBTF3P11 - 13q22.3 [CytoView hg19]  BTF3P11 - 13q22.3 [CytoView hg38]
genome Data Viewer NCBIBTF3P11 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC106717 BC106718 BC115358
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BTF3P11
Gene ExpressionBTF3P11 [ NCBI-GEO ]   BTF3P11 [ EBI - ARRAY_EXPRESS ]   BTF3P11 [ SEEK ]   BTF3P11 [ MEM ]
Gene Expression Viewer (FireBrowse)BTF3P11 [ Firebrowse - Broad ]
GenevisibleExpression of BTF3P11 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)690
GTEX Portal (Tissue expression)BTF3P11
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BTF3P11
DMDM Disease mutations690
Blocks (Seattle)BTF3P11
IPIIPI00015943   
Protein Interaction databases
BioGRIDBTF3P11
STRING (EMBL)BTF3P11
ZODIACBTF3P11
Ontologies - Pathways
Huge Navigator BTF3P11 [HugePedia]
snp3D : Map Gene to Disease690
BioCentury BCIQBTF3P11
ClinGenBTF3P11
Clinical trials, drugs, therapy
Protein Interactions : CTD690
Pharm GKB GenePA25446
Clinical trialBTF3P11
Miscellaneous
canSAR (ICR)BTF3P11 (select the gene name)
HarmonizomeBTF3P11
DataMed IndexBTF3P11
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBTF3P11
EVEXBTF3P11
GoPubMedBTF3P11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:49:02 CEST 2020

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