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BTG3 (BTG anti-proliferation factor 3)

Identity

Alias_namesBTG family, member 3
BTG family member 3
Alias_symbol (synonym)ANA
tob55
APRO4
Other aliasANA/BTG3
TOB5
TOB55
TOFA
HGNC (Hugo) BTG3
LocusID (NCBI) 10950
Atlas_Id 849
Location 21q21.1  [Link to chromosome band 21q21]
Location_base_pair Starts at 17593650 and ends at 17612950 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BTG3 (21q21.1) / FHL1 (Xq26.3)LARP1B (4q28.2) / BTG3 (21q21.1)PCDH11X (Xq21.31) / BTG3 (21q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BTG3   1132
Cards
Entrez_Gene (NCBI)BTG3  10950  BTG anti-proliferation factor 3
AliasesANA; ANA/BTG3; APRO4; TOB5; 
TOB55; TOFA
GeneCards (Weizmann)BTG3
Ensembl hg19 (Hinxton)ENSG00000154640 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000154640 [Gene_View]  chr21:17593650-17612950 [Contig_View]  BTG3 [Vega]
ICGC DataPortalENSG00000154640
TCGA cBioPortalBTG3
AceView (NCBI)BTG3
Genatlas (Paris)BTG3
WikiGenes10950
SOURCE (Princeton)BTG3
Genetics Home Reference (NIH)BTG3
Genomic and cartography
GoldenPath hg38 (UCSC)BTG3  -     chr21:17593650-17612950 -  21q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BTG3  -     21q21.1   [Description]    (hg19-Feb_2009)
EnsemblBTG3 - 21q21.1 [CytoView hg19]  BTG3 - 21q21.1 [CytoView hg38]
Mapping of homologs : NCBIBTG3 [Mapview hg19]  BTG3 [Mapview hg38]
OMIM605674   
Gene and transcription
Genbank (Entrez)AK289408 AL049332 BC011957 BC028229 BF110486
RefSeq transcript (Entrez)NM_001130914 NM_006806
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_187627
Consensus coding sequences : CCDS (NCBI)BTG3
Cluster EST : UnigeneHs.473420 [ NCBI ]
CGAP (NCI)Hs.473420
Alternative Splicing GalleryENSG00000154640
Gene ExpressionBTG3 [ NCBI-GEO ]   BTG3 [ EBI - ARRAY_EXPRESS ]   BTG3 [ SEEK ]   BTG3 [ MEM ]
Gene Expression Viewer (FireBrowse)BTG3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10950
GTEX Portal (Tissue expression)BTG3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14201   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14201  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14201
Splice isoforms : SwissVarQ14201
PhosPhoSitePlusQ14201
Domaine pattern : Prosite (Expaxy)BTG_1 (PS00960)    BTG_2 (PS01203)   
Domains : Interpro (EBI)Anti_prolifrtn   
Domain families : Pfam (Sanger)BTG (PF07742)   
Domain families : Pfam (NCBI)pfam07742   
Domain families : Smart (EMBL)btg1 (SM00099)  
Conserved Domain (NCBI)BTG3
DMDM Disease mutations10950
Blocks (Seattle)BTG3
SuperfamilyQ14201
Human Protein AtlasENSG00000154640
Peptide AtlasQ14201
HPRD10415
IPIIPI00183697   IPI00334053   IPI00746324   IPI00788830   
Protein Interaction databases
DIP (DOE-UCLA)Q14201
IntAct (EBI)Q14201
FunCoupENSG00000154640
BioGRIDBTG3
STRING (EMBL)BTG3
ZODIACBTG3
Ontologies - Pathways
QuickGOQ14201
Ontology : AmiGOprotein binding  cytoplasm  negative regulation of cell proliferation  negative regulation of mitotic cell cycle  
Ontology : EGO-EBIprotein binding  cytoplasm  negative regulation of cell proliferation  negative regulation of mitotic cell cycle  
Pathways : KEGGRNA degradation   
NDEx NetworkBTG3
Atlas of Cancer Signalling NetworkBTG3
Wikipedia pathwaysBTG3
Orthology - Evolution
OrthoDB10950
GeneTree (enSembl)ENSG00000154640
Phylogenetic Trees/Animal Genes : TreeFamBTG3
HOVERGENQ14201
HOGENOMQ14201
Homologs : HomoloGeneBTG3
Homology/Alignments : Family Browser (UCSC)BTG3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBTG3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BTG3
dbVarBTG3
ClinVarBTG3
1000_GenomesBTG3 
Exome Variant ServerBTG3
ExAC (Exome Aggregation Consortium)BTG3 (select the gene name)
Genetic variants : HAPMAP10950
Genomic Variants (DGV)BTG3 [DGVbeta]
DECIPHERBTG3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBTG3 
Mutations
ICGC Data PortalBTG3 
TCGA Data PortalBTG3 
Broad Tumor PortalBTG3
OASIS PortalBTG3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBTG3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBTG3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BTG3
DgiDB (Drug Gene Interaction Database)BTG3
DoCM (Curated mutations)BTG3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BTG3 (select a term)
intoGenBTG3
Cancer3DBTG3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605674   
Orphanet
MedgenBTG3
Genetic Testing Registry BTG3
NextProtQ14201 [Medical]
TSGene10950
GENETestsBTG3
Huge Navigator BTG3 [HugePedia]
snp3D : Map Gene to Disease10950
BioCentury BCIQBTG3
ClinGenBTG3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10950
Chemical/Pharm GKB GenePA25452
Clinical trialBTG3
Miscellaneous
canSAR (ICR)BTG3 (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBTG3
EVEXBTG3
GoPubMedBTG3
iHOPBTG3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:08:07 CEST 2017

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